Strain identifier

BacDive ID: 23563

Type strain: No

Species: Alteromonas mediterranea

Strain Designation: AMMED64, Aegean Sea MED64, AMASMED64

Strain history: <- A. Gonzaga Moltó, Univ. Miguel Hernandez, Dept. Microbiologia, Alicante, Spain; AMASMED64 <- A. Hagstrom, Marine Science, Univ. Kalmar, Sweden

NCBI tax ID(s): 314275 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 20289

BacDive-ID: 23563

DSM-Number: 26499

keywords: genome sequence, Bacteria, Gram-negative

description: Alteromonas mediterranea AMMED64 is a Gram-negative bacterium that was isolated from superficial waters.

NCBI tax id

  • NCBI tax id: 314275
  • Matching level: species

strain history

  • @ref: 20289
  • history: <- A. Gonzaga Moltó, Univ. Miguel Hernandez, Dept. Microbiologia, Alicante, Spain; AMASMED64 <- A. Hagstrom, Marine Science, Univ. Kalmar, Sweden

doi: 10.13145/bacdive23563.20240916.9.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Alteromonadales
  • family: Alteromonadaceae
  • genus: Alteromonas
  • species: Alteromonas mediterranea
  • full scientific name: Alteromonas mediterranea Ivanova et al. 2015

@ref: 20289

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Alteromonadales

family: Alteromonadaceae

genus: Alteromonas

species: Alteromonas mediterranea

full scientific name: Alteromonas mediterranea Ivanova et al. 2015

strain designation: AMMED64, Aegean Sea MED64, AMASMED64

type strain: no

Morphology

cell morphology

  • @ref: 69480
  • gram stain: negative
  • confidence: 100

Culture and growth conditions

culture medium

  • @ref: 20289
  • name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/514
  • composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

culture temp

  • @ref: 20289
  • growth: positive
  • type: growth
  • temperature: 20

Physiology and metabolism

spore formation

  • @ref: 69480
  • spore formation: no
  • confidence: 95.157

Isolation, sampling and environmental information

isolation

  • @ref: 20289
  • sample type: superficial waters
  • geographic location: Aegean Sea, ("32°81' N, 34°69'E") at a depth of 5 m
  • country: Lebanon
  • origin.country: LBN
  • continent: Asia
  • latitude: 33.35
  • longitude: 35.15

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic
  • Cat3: #Surface water

Safety information

risk assessment

  • @ref: 20289
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

Genome sequences

  • @ref: 66792
  • description: Alteromonas mediterranea MED64 Aegean Sea MED64
  • accession: GCA_000439495
  • assembly level: complete
  • database: ncbi
  • NCBI tax ID: 1300254

Genome-based predictions

predictions

@reftraitmodeldescriptionpredictionconfidencetraining_data
69480gram-positivegram-positivePositive reaction to Gram-stainingno100no
69480anaerobicanaerobicAbility to grow under anoxygenic conditions (including facultative anaerobes)no96.869no
69480aerobicaerobicAbility to grow under oxygenic conditions (including facultative aerobes)yes70.768no
69480spore-formingspore-formingAbility to form endo- or exosporesno95.157no
69480thermophilicthermophileAbility to grow at temperatures above or equal to 45°Cno99.5yes
69480flagellatedmotile2+Ability to perform flagellated movementyes87.828no

External links

@ref: 20289

culture collection no.: DSM 26499, MED 64

straininfo link

  • @ref: 87657
  • straininfo: 407810

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
20289Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-26499Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26499)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
87657Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID407810.1