Strain identifier

BacDive ID: 23547

Type strain: Yes

Species: Aeromonas australiensis

Strain Designation: 266

Strain history: CIP <- 2013, CECT <- 2011 M.J. Figueras, Univ. Rovira Virgili, Spain <- M. Aravena-Román, Univ. Western Australia, Australia

NCBI tax ID(s): 1114880 (species)

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General

@ref: 20267

BacDive-ID: 23547

DSM-Number: 27583

keywords: genome sequence, 16S sequence, Bacteria, facultative anaerobe, mesophilic, Gram-negative, motile, rod-shaped

description: Aeromonas australiensis 266 is a facultative anaerobe, mesophilic, Gram-negative bacterium that was isolated from irrigation water system at a sports ground.

NCBI tax id

  • NCBI tax id: 1114880
  • Matching level: species

strain history

@refhistory
365472013, CECT
20267<- M. J. Figueras, Rovira i Virgili University, Reus, Spain; 266 <- M. Aravena Román, Univ. Western Australia, Crawley
116646CIP <- 2013, CECT <- 2011 M.J. Figueras, Univ. Rovira Virgili, Spain <- M. Aravena-Román, Univ. Western Australia, Australia

doi: 10.13145/bacdive23547.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Aeromonadales
  • family: Aeromonadaceae
  • genus: Aeromonas
  • species: Aeromonas australiensis
  • full scientific name: Aeromonas australiensis Aravena-Román et al. 2013

@ref: 20267

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Aeromonadales

family: Aeromonadaceae

genus: Aeromonas

species: Aeromonas australiensis

full scientific name: Aeromonas australiensis Aravena-Román et al. 2013

strain designation: 266

type strain: yes

Morphology

cell morphology

@refgram staincell lengthcell widthcell shapemotility
30616negative2.25 µm0.85 µmrod-shapedyes
116646negativerod-shapedyes

pigmentation

  • @ref: 30616
  • production: yes

multimedia

  • @ref: 20267
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_27583.jpg
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
36547MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
20267NUTRIENT AGAR (DSMZ Medium 1)yesName: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled waterhttps://mediadive.dsmz.de/medium/1
116646CIP Medium 13yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=13
116646CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
20267positivegrowth28mesophilic
30616positivegrowth25-35mesophilic
36547positivegrowth30mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 30616
  • oxygen tolerance: facultative anaerobe

spore formation

  • @ref: 30616
  • spore formation: no

halophily

  • @ref: 30616
  • salt: NaCl
  • growth: positive
  • tested relation: growth
  • concentration: 0-3 %

observation

  • @ref: 30616
  • observation: aggregates in clumps

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3061630089acetate+carbon source
3061616947citrate+carbon source
3061624996lactate+carbon source
3061627248urocanic acid+carbon source
3061617632nitrate+reduction

metabolite production

  • @ref: 30616
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

  • @ref: 30616
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: +

enzymes

@refvalueactivityec
30616catalase+1.11.1.6
30616gelatinase+
30616cytochrome oxidase+1.9.3.1

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
20267irrigation water system at a sports groundWestern AustraliaAustraliaAUSAustralia and Oceania
116646Environment, Irrigation water systemSouth west of Western AustraliaAustraliaAUSAustralia and Oceania

isolation source categories

Cat1Cat2Cat3
#Engineered#Industrial#Engineered product
#Environmental#Aquatic

taxonmaps

  • @ref: 69479
  • File name: preview.99_537.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_11;96_15;97_15;98_18;99_537&stattab=map
  • Last taxonomy: Aeromonas
  • 16S sequence: HE611955
  • Sequence Identity:
  • Total samples: 1750
  • soil counts: 68
  • aquatic counts: 1144
  • animal counts: 488
  • plant counts: 50

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
202671Risk group (German classification)
1166461Risk group (French classification)

Sequence information

16S sequences

  • @ref: 20267
  • description: Aeromonas australiensis partial 16S rRNA gene, type strain 266T
  • accession: HE611955
  • length: 1322
  • database: ena
  • NCBI tax ID: 1114880

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Aeromonas australiensis CECT 8023GCA_000819725contigncbi1114880
66792Aeromonas australiensis CECT 80231114880.3wgspatric1114880
66792Aeromonas australiensis CECT 80232639763046draftimg1114880

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
motileyes91.654no
flagellatedyes93.809no
gram-positiveno98.689yes
anaerobicno96.034yes
aerobicyes79.161yes
halophileno76.495no
spore-formingno95.763yes
thermophileno99.012yes
glucose-utilyes90.769no
glucose-fermentyes85.411no

External links

@ref: 20267

culture collection no.: DSM 27583, CECT 8023, LMG 26707, CIP 110626, LMG 2670

straininfo link

  • @ref: 87643
  • straininfo: 2411

literature

  • topic: Phylogeny
  • Pubmed-ID: 23159749
  • title: Aeromonas australiensis sp. nov., isolated from irrigation water.
  • authors: Aravena-Roman M, Beaz-Hidalgo R, Inglis TJJ, Riley TV, Martinez-Murcia AJ, Chang BJ, Figueras MJ
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.040162-0
  • year: 2012
  • mesh: Aeromonas/*classification/genetics/isolation & purification, Agricultural Irrigation, Bacterial Typing Techniques, DNA, Bacterial/genetics, Fatty Acids/analysis, Genes, Bacterial, Molecular Sequence Data, Nucleic Acid Hybridization, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Water Microbiology, Western Australia
  • topic2: Genetics

Reference

@idauthorstitledoi/urlcatalogueID_cross_referencepubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
20267Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-27583Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 27583)
30616Barberan A, Caceres Velazquez H, Jones S, Fierer N.Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information10.1128/mSphere.00237-172694728776041
36547Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/30428
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
87643Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID2411.1
116646Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20110626Collection of Institut Pasteur (CIP 110626)