Strain identifier

BacDive ID: 2354

Type strain: Yes

Species: Cellulomonas flavigena

Strain Designation: 134, NRS-134

Strain history: CIP <- 1982, ATCC <- N.R. Smith: strain NRS-134

NCBI tax ID(s): 446466 (strain), 1711 (species)

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General

@ref: 8534

BacDive-ID: 2354

DSM-Number: 20109

keywords: genome sequence, 16S sequence, Bacteria, aerobe, mesophilic, Gram-positive, rod-shaped

description: Cellulomonas flavigena 134 is an aerobe, mesophilic, Gram-positive bacterium of the family Cellulomonadaceae.

NCBI tax id

NCBI tax idMatching level
446466strain
1711species

strain history

@refhistory
8534<- ATCC <- N.R. Smith, 134
67770CIP 82.10 <-- ATCC 482 <-- N. R. Smith NRS 134.
119377CIP <- 1982, ATCC <- N.R. Smith: strain NRS-134

doi: 10.13145/bacdive2354.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Cellulomonadaceae
  • genus: Cellulomonas
  • species: Cellulomonas flavigena
  • full scientific name: Cellulomonas flavigena (Kellerman and McBeth 1912) Bergey et al. 1923 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Bacillus flavigena

@ref: 8534

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Cellulomonadaceae

genus: Cellulomonas

species: Cellulomonas flavigena

full scientific name: Cellulomonas flavigena (Kellerman and McBeth 1912) Bergey et al. 1923 emend. Nouioui et al. 2018

strain designation: 134, NRS-134

type strain: yes

Morphology

cell morphology

@refgram staincell shapemotilityconfidence
43361positiverod-shapedno
69480no90.694
69480positive100
119377positiverod-shapedno

colony morphology

@refcolony colorincubation periodmedium usedcolony sizehemolysis ability
18620Ivory (1014)10-14 daysISP 2
18620Zinc yellow (1018)10-14 daysISP 3
18620Daffodil yellow (1007)10-14 daysISP 4
18620Zinc yellow (1018)10-14 daysISP 5
18620Colorless10-14 daysISP 6
18620Colorless10-14 daysISP 7
43361yellowyeast extract-glucose agar5 mm
1193771

multicellular morphology

@refforms multicellular complexmedium name
18620noISP 2
18620noISP 3
18620noISP 4
18620noISP 5
18620noISP 6
18620noISP 7

multimedia

  • @ref: 66793
  • multimedia content: EM_DSM_20109_1.jpg
  • caption: electron microscopic image
  • intellectual property rights: © HZI/Manfred Rohde

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
18620ISP 2yesName: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes
18620ISP 3yesName: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms:
18620ISP 4yesName: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml
18620ISP 5yesName: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes
18620ISP 6yesName: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes
18620ISP 7yesName: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes
8534CORYNEBACTERIUM AGAR (DSMZ Medium 53)yesName: CORYNEBACTERIUM AGAR (DSMZ Medium 53) Composition: Agar 15.0 g/l Casein peptone 10.0 g/l NaCl 5.0 g/l Glucose 5.0 g/l Yeast extract 5.0 g/l Distilled waterhttps://mediadive.dsmz.de/medium/53
37348MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
43361yeast extract-glucose agaryes
43361yeast glucose agaryespeptone 1%, yeast extract 0.5%, glucose 0.5%, agar 1%
119377CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
18620positiveoptimum28mesophilic
8534positivegrowth30mesophilic
37348positivegrowth30mesophilic
43361positiveoptimum30mesophilic
49475positivegrowth26-42
67770positivegrowth28mesophilic
119377positivegrowth10-41
119377nogrowth5psychrophilic
119377nogrowth45thermophilic

culture pH

  • @ref: 43361
  • ability: positive
  • type: optimum
  • pH: 7

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
43361aerobe
49475aerobe
119377obligate aerobe

spore formation

  • @ref: 69480
  • spore formation: no
  • confidence: 99.574

halophily

@refsaltgrowthtested relationconcentration
18620NaClpositivemaximum2.5 %
119377NaClpositivegrowth0-4 %
119377NaClnogrowth6 %
119377NaClnogrowth8 %
119377NaClnogrowth10 %

murein

  • @ref: 8534
  • murein short key: A21.04
  • type: A4ß L-Orn-D-Asp

observation

  • @ref: 67770
  • observation: quinones: MK-9(H4)

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
4336116004(R)-lactate-assimilation
4336116651(S)-lactate-assimilation
4336130089acetate+assimilation
4336117234glucose+assimilation
4336117632nitrate+reduction
4336116634raffinose-assimilation
4336133942ribose+assimilation
68371Potassium 5-ketogluconate+builds acid from
68371Potassium 2-ketogluconate-builds acid from
6837124265gluconate-builds acid from
6837118403L-arabitol-builds acid from
6837118333D-arabitol-builds acid from
6837118287L-fucose-builds acid from
6837128847D-fucose-builds acid from
6837116443D-tagatose-builds acid from
6837162318D-lyxose+builds acid from
6837132528turanose+builds acid from
6837128066gentiobiose+builds acid from
6837117151xylitol-builds acid from
6837128087glycogen+builds acid from
6837128017starch+builds acid from
683716731melezitose-builds acid from
6837117992sucrose+builds acid from
6837128053melibiose-builds acid from
6837117306maltose+builds acid from
683714853esculin+builds acid from
6837118305arbutin-builds acid from
6837127613amygdalin-builds acid from
6837159640N-acetylglucosamine-builds acid from
68371320061methyl alpha-D-glucopyranoside-builds acid from
6837143943methyl alpha-D-mannoside-builds acid from
6837117924D-sorbitol-builds acid from
6837116899D-mannitol-builds acid from
6837117268myo-inositol-builds acid from
6837116813galactitol-builds acid from
6837162345L-rhamnose-builds acid from
6837117266L-sorbose-builds acid from
6837115824D-fructose+builds acid from
6837117634D-glucose+builds acid from
6837112936D-galactose+builds acid from
6837115963ribitol-builds acid from
6837165328L-xylose-builds acid from
6837165327D-xylose+builds acid from
6837130849L-arabinose+builds acid from
6837117108D-arabinose-builds acid from
6837117113erythritol-builds acid from
6837117754glycerol+builds acid from
683685291gelatin-hydrolysis
6836827897tryptophan-energy source
6836816199urea-hydrolysis
6836816947citrate-assimilation
6836818257ornithine-degradation
6836825094lysine-degradation
6836829016arginine-hydrolysis
11937716947citrate-carbon source
1193774853esculin+hydrolysis
119377606565hippurate-hydrolysis
11937717632nitrate+reduction
11937716301nitrite-reduction
11937717632nitrate-respiration
6837917632nitrate-reduction
683794853esculin+hydrolysis
6837916199urea+hydrolysis
683795291gelatin+hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose+fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol+fermentation
6837917306maltose+fermentation
6837917716lactose+fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

metabolite production

@refChebi-IDmetaboliteproduction
6836815688acetoinno
6836835581indoleno
6836816136hydrogen sulfideno
11937735581indoleno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testindole testmethylred-test
6836815688acetoin-
6836835581indole-
11937715688acetoin-
11937717234glucose+

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382beta-glucosidase+3.2.1.21
68382alpha-glucosidase+3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase+3.2.1.23
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382alkaline phosphatase-3.1.3.1
68379gelatinase+
68379urease+3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase+3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase+3.2.1.23
68379beta-glucuronidase+3.2.1.31
68379alkaline phosphatase-3.1.3.1
68379pyrrolidonyl arylamidase+3.4.19.3
68379pyrazinamidase-3.5.1.B15
68368gelatinase-
68368tryptophan deaminase-4.1.99.1
68368urease-3.5.1.5
68368ornithine decarboxylase-4.1.1.17
68368lysine decarboxylase-4.1.1.18
68368arginine dihydrolase-3.5.3.6
68368beta-galactosidase+3.2.1.23
119377oxidase-
119377beta-galactosidase+3.2.1.23
119377alcohol dehydrogenase-1.1.1.1
119377gelatinase+
119377amylase+
119377DNase+
119377caseinase+3.4.21.50
119377catalase+1.11.1.6
119377tween esterase-
119377gamma-glutamyltransferase-2.3.2.2
119377lecithinase-
119377lipase-
119377lysine decarboxylase-4.1.1.18
119377ornithine decarboxylase-4.1.1.17
119377phenylalanine ammonia-lyase-4.3.1.24
119377protease+
119377tryptophan deaminase-
119377urease-3.5.1.5

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    49475C14:015.614
    49475C16:014.716
    49475C14:0 ISO7.813.618
    49475C15:0 ANTEISO45.714.711
    49475C15:0 ISO4.614.621
    49475C15:1 ANTEISO A8.414.526
    49475C16:0 iso3.215.626
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELGLURIBXYLMANMALLACSACGLYG
18620--+-+++++++-+-+++--

API zym

@refAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- FucosidaseControl
18620--+-+++++++-+-+++--
119377-++-+----++++-+++---

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGEL
18620+----------

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
119377+--++/-+--+/-++++/------------++/-+/-++/--++/-+/--+/-++-+++-------+

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
119377+++++--+-++++--++-+-++---------+---+------------------------+--------------+--+--------------------

Isolation, sampling and environmental information

taxonmaps

  • @ref: 69479
  • File name: preview.99_3003.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_9;96_432;97_1685;98_2313;99_3003&stattab=map
  • Last taxonomy: Cellulomonas
  • 16S sequence: X79463
  • Sequence Identity:
  • Total samples: 1253
  • soil counts: 334
  • aquatic counts: 224
  • animal counts: 635
  • plant counts: 60

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
186201Hazard group
85341Risk group (German classification)
1193771Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218C.flavigena 16S rRNA geneX837991500ena446466
67770C.flavigena NCIMB 8073 16S rDNAX794631484ena446466

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Cellulomonas flavigena DSM 20109GCA_000092865completencbi446466
66792Cellulomonas flavigena DSM 20109446466.7completepatric446466
66792Cellulomonas flavigena 134, DSM 20109646564520completeimg446466

GC content

@refGC-contentmethod
853472.7
4336172.7-74.8thermal denaturation, midpoint method (Tm)
6777074.29genome sequence analysis
6777072.7thermal denaturation, midpoint method (Tm)

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingyes58no
motileno88.102yes
flagellatedno97.493yes
gram-positiveyes93.371no
anaerobicno98.852yes
aerobicyes88.629yes
halophileno86.391no
spore-formingno87.883no
glucose-utilyes86.254no
thermophileno99.252no
glucose-fermentno81.038no

External links

@ref: 8534

culture collection no.: DSM 20109, ATCC 482, CCM 1926, NCIB 8073, CCUG 28996, JCM 18109, BCRC 11376, BUCSAV 180, CCUG 12162, CFBP 4223, CGMCC 1.1914, CIP 82.10, IAM 12109, IFO 3754, IFO 3775, IMET 10357, IMSNU 21278, JCM 1489, JCM 20412, KCCM 21192, KCTC 1038, KCTC 9104, LMG 16263, NBRC 3754, NBRC 3775, NCAIM B.01383, NCIMB 8073, PCM 2333, VKM Ac-1137, CCUG 23578

straininfo link

  • @ref: 71909
  • straininfo: 389451

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Metabolism12382063Dissimilatory reduction of Cr(VI), Fe(III), and U(VI) by Cellulomonas isolates.Sani RK, Peyton BM, Smith WA, Apel WA, Petersen JNAppl Microbiol Biotechnol10.1007/s00253-002-1069-62002Anaerobiosis, Cellulomonas/isolation & purification/*metabolism, Chromium/*metabolism, Iron/*metabolism, Oxidation-Reduction, Uranium/*metabolismEnzymology
Phylogeny20729313Cellulomonas phragmiteti sp. nov., a cellulolytic bacterium isolated from reed (Phragmites australis) periphyton in a shallow soda pond.Rusznyak A, Toth EM, Schumann P, Sproer C, Makk J, Szabo G, Vladar P, Marialigeti K, Borsodi AKInt J Syst Evol Microbiol10.1099/ijs.0.022608-02010Bacterial Typing Techniques, Base Composition, Cellulomonas/*classification/genetics/isolation & purification, DNA, Bacterial/genetics, Fatty Acids/chemistry, Hungary, Molecular Sequence Data, Nucleic Acid Hybridization, Peptidoglycan/chemistry, *Phylogeny, Poaceae/*microbiology, Ponds, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Vitamin K 2/analogs & derivatives/chemistryGenetics
Enzymology22230776Novel modular endo-beta-1,4-xylanase with transglycosylation activity from Cellulosimicrobium sp. strain HY-13 that is homologous to inverting GH family 6 enzymes.Kim DY, Ham SJ, Kim HJ, Kim J, Lee MH, Cho HY, Shin DH, Rhee YH, Son KH, Park HYBioresour Technol10.1016/j.biortech.2011.12.1062011Amino Acid Sequence, Base Sequence, Carbohydrate Metabolism, DNA Primers, Electrophoresis, Polyacrylamide Gel, Endo-1,4-beta Xylanases/chemistry/*metabolism, Glycosylation, Gram-Negative Bacteria/classification/*enzymology, Molecular Sequence Data, Phylogeny, Polymerase Chain Reaction, Recombinant Proteins/metabolism, Sequence Homology, Amino AcidMetabolism
Phylogeny23210725Characterization and flocculation properties of biopolymeric flocculant (glycosaminoglycan) produced by Cellulomonas sp. Okoh.Nwodo UU, Okoh AIJ Appl Microbiol10.1111/jam.120952013Base Sequence, Cellulomonas/*chemistry/genetics, *Flocculation, Fresh Water/microbiology, Glycosaminoglycans/biosynthesis/*chemistry, Hydrogen-Ion Concentration, RNA, Ribosomal, 16S/genetics, Temperature
Phylogeny23342046The genome sequences of Cellulomonas fimi and "Cellvibrio gilvus" reveal the cellulolytic strategies of two facultative anaerobes, transfer of "Cellvibrio gilvus" to the genus Cellulomonas, and proposal of Cellulomonas gilvus sp. nov.Christopherson MR, Suen G, Bramhacharya S, Jewell KA, Aylward FO, Mead D, Brumm PJPLoS One10.1371/journal.pone.00539542013Cellulomonas/classification/*genetics/*metabolism, Cellulose/*metabolism, Cellvibrio/classification/*genetics/*metabolism, Energy Metabolism/genetics, Fermentation/genetics, Genome, Bacterial/*genetics, Hydrolysis, Phylogeny, Polysaccharides/metabolism, Sequence Homology, Nucleic AcidMetabolism
Metabolism26950732Proteomic Analysis of the Secretome of Cellulomonas fimi ATCC 484 and Cellulomonas flavigena ATCC 482.Wakarchuk WW, Brochu D, Foote S, Robotham A, Saxena H, Erak T, Kelly JPLoS One10.1371/journal.pone.01511862016Carboxymethylcellulose Sodium/metabolism, Cellulomonas/enzymology/*metabolism, *Proteomics, Species Specificity, Xylans/metabolismPhylogeny
Phylogeny29090357Cellulomonas macrotermitis sp. nov., a chitinolytic and cellulolytic bacterium isolated from the hindgut of a fungus-growing termite.Sun X, Li J, Du J, Xiao H, Ni JAntonie Van Leeuwenhoek10.1007/s10482-017-0968-62017Animals, Cellulomonas/chemistry/*classification/genetics/isolation & purification, *Gastrointestinal Microbiome, Isoptera/*microbiology, Metabolomics/methods, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNATranscriptome
Phylogeny32038002Cellulomonas shaoxiangyii sp. nov., isolated from faeces of Tibetan antelope (Pantholops hodgsonii) on the Qinghai-Tibet Plateau.Tian Z, Lu S, Jin D, Yang J, Pu J, Lai XH, Ren ZH, Wu XM, Li J, Wang S, Xu JInt J Syst Evol Microbiol10.1099/ijsem.0.0039392020Animals, Antelopes/*microbiology, Bacterial Typing Techniques, Base Composition, Cell Wall/chemistry, Cellulomonas/*classification/isolation & purification, DNA, Bacterial/genetics, Fatty Acids/chemistry, Feces/*microbiology, Nucleic Acid Hybridization, Ornithine/chemistry, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Tibet, Vitamin K 2/analogs & derivatives/chemistryTranscriptome

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
8534Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20109)https://www.dsmz.de/collection/catalogue/details/culture/DSM-20109
18620Wink, J.http://www.dsmz.de/microorganisms/wink_pdf/DSM20109.pdfCompendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
37348Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/11277
43361Erko Stackenbrandt, Otto Kandler10.1099/00207713-29-4-273Taxonomy of the Genus Cellulomonas, Based on Phenotypic Characters and Deoxyribonucleic Acid-Deoxyribonucleic Acid Homology, and Proposal of Seven Neotype StrainsIJSEM 29: 273-282 1979
49475Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 28996)https://www.ccug.se/strain?id=28996
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
66793Mukherjee et al.10.1038/nbt.3886GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life 35: 676-683 201728604660
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg10.1093/nar/gkaa1025BRENDA, the ELIXIR core data resource in 2021: new developments and updatesNucleic Acids Res. 49: D498-D508 202033211880
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68368Automatically annotated from API 20E
68371Automatically annotated from API 50CH acid
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
71909Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID389451.1StrainInfo: A central database for resolving microbial strain identifiers
119377Curators of the CIPCollection of Institut Pasteur (CIP 82.10)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2082.10