Strain identifier
BacDive ID: 23380
Type strain:
Species: unclassified bacterium
Strain Designation: 19gly3
Strain history: <- P. H. Janssen, University of Melbourne, Parkville, Australia; 19gly3 <- P. H. Janssen {1995}
NCBI tax ID(s): 1869227 (species)
General
@ref: 4269
BacDive-ID: 23380
DSM-Number: 11262
keywords: 16S sequence, anaerobe, mesophilic
description: unclassified bacterium 19gly3 is an anaerobe, mesophilic prokaryote that was isolated from polluted pond.
NCBI tax id
- NCBI tax id: 1869227
- Matching level: species
strain history
- @ref: 4269
- history: <- P. H. Janssen, University of Melbourne, Parkville, Australia; 19gly3 <- P. H. Janssen {1995}
doi: 10.13145/bacdive23380.20230509.8.1
Name and taxonomic classification
@ref: 4269
phylum: Not assigned to order
class: Not assigned to order
order: Clostridiales
family: Not assigned to family
genus: unclassified
species: unclassified bacterium
full scientific name: unclassified bacterium
strain designation: 19gly3
type strain: no
Culture and growth conditions
culture medium
- @ref: 4269
- name: ANAEROBIC FRESHWATER (FWM) MEDIUM (DSMZ Medium 503)
- growth: yes
- link: https://mediadive.dsmz.de/medium/503
- composition: Name: ANAEROBIC FRESHWATER (FWM) MEDIUM (DSMZ Medium 503; with strain-specific modifications) Composition: Na-3-hydroxybutyrate 2.49252 g/l Na2CO3 1.49551 g/l Yeast extract 0.997009 g/l NaCl 0.997008 g/l KCl 0.498505 g/l MgCl2 x 6 H2O 0.398803 g/l Na2S x 9 H2O 0.299103 g/l NH4Cl 0.249252 g/l KH2PO4 0.199402 g/l CaCl2 x 2 H2O 0.149552 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l Sodium resazurin 0.000498505 g/l NaOH 0.000498504 g/l Pyridoxine hydrochloride 0.000299103 g/l Nicotinic acid 0.000199402 g/l Thiamine-HCl x 2 H2O 0.000199402 g/l CoCl2 x 6 H2O 0.000189432 g/l Calcium pantothenate 9.97009e-05 g/l MnCl2 x 4 H2O 9.97009e-05 g/l Vitamin B12 9.97009e-05 g/l p-Aminobenzoic acid 7.97607e-05 g/l ZnCl2 6.97906e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l D-(+)-biotin 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Distilled water
culture temp
- @ref: 4269
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 4269
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 4269
- sample type: polluted pond
- geographic location: Hamilton
- country: New Zealand
- origin.country: NZL
- continent: Australia and Oceania
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Engineered | #Contamination | |
#Environmental | #Aquatic | #Pond (small) |
taxonmaps
- @ref: 69479
- File name: preview.99_16831.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_207;96_1189;97_1399;98_12739;99_16831&stattab=map
- Last taxonomy: Schnuerera
- 16S sequence: AF550609
- Sequence Identity:
- Total samples: 4440
- soil counts: 2635
- aquatic counts: 647
- animal counts: 754
- plant counts: 404
Sequence information
16S sequences
- @ref: 4269
- description: Peptostreptococcaceae bacterium 19gly3 16S ribosomal RNA gene, partial sequence
- accession: AF550609
- length: 1433
- database: ena
- NCBI tax ID: 214818
GC content
- @ref: 4269
- GC-content: 38.6
- method: high performance liquid chromatography (HPLC)
External links
@ref: 4269
culture collection no.: DSM 11262
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
4269 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 11262) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-11262 | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta |