Strain identifier

BacDive ID: 23336

Type strain: Yes

Species: Actinoallomurus acanthiterrae

Strain Designation: 2614A723

Strain history: DSM 45727 <-- Y.-L. Tang; Wuhan Univ. Sch. of Pharm. Sci., China; 2614A723.

NCBI tax ID(s): 1136071 (species)

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General

@ref: 18144

BacDive-ID: 23336

DSM-Number: 45727

keywords: 16S sequence, Bacteria, aerobe, spore-forming, mesophilic, Gram-positive, ovoid-shaped

description: Actinoallomurus acanthiterrae 2614A723 is an aerobe, spore-forming, mesophilic bacterium that was isolated from rhizosphere soil of mangrove plant Acanthus ilicifolius.

NCBI tax id

  • NCBI tax id: 1136071
  • Matching level: species

strain history

@refhistory
18144<- Y.-L. Tang, Wuhan Univ. School of Pharmaceutical Sciences, China; 2614A723
67770DSM 45727 <-- Y.-L. Tang; Wuhan Univ. Sch. of Pharm. Sci., China; 2614A723.

doi: 10.13145/bacdive23336.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Streptosporangiales
  • family: Thermomonosporaceae
  • genus: Actinoallomurus
  • species: Actinoallomurus acanthiterrae
  • full scientific name: Actinoallomurus acanthiterrae Tang et al. 2013

@ref: 18144

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Thermomonosporaceae

genus: Actinoallomurus

species: Actinoallomurus acanthiterrae

full scientific name: Actinoallomurus acanthiterrae Tang et al. 2013

strain designation: 2614A723

type strain: yes

Morphology

cell morphology

  • @ref: 30735
  • gram stain: positive
  • cell shape: ovoid-shaped
  • motility: no

colony morphology

@refcolony colormedium used
69423Beige (1001)ISP 7
69423Grey white (9002)ISP 5
69423Ivory (1014)suter without tyrosine
69423Light ivory (1015)ISP 4
69423Salmon pink (3022)ISP 3
69423Sand yellow (1002)ISP 2
69423Sand yellow (1002)ISP 6
69423Stone grey (7030)suter with tyrosine

multicellular morphology

@refforms multicellular complexcomplex namemedium name
69423noAerial myceliumISP 2
69423noAerial myceliumISP 3
69423noAerial myceliumISP 4
69423noAerial myceliumISP 5
69423noAerial myceliumISP 6
69423noAerial myceliumISP 7
69423noAerial myceliumsuter with tyrosine
69423noAerial myceliumsuter without tyrosine

pigmentation

@refproductionnamecolor
30735yes
69423yesMelanin
69423yessoluble pigmentBeige (1001), clay brown (8003)

multimedia

@refmultimedia contentcaptionintellectual property rights
69423DSM_45727_image3.jpegPlates (553, ISP2, ISP3, ISP4, ISP5, ISP7)Helmholtz-Zentrum für Infektionsforschung GmbH
69423DSM_45727_image4.jpegPlates (553, ISP2, ISP3, ISP4, ISP5, ISP7)Helmholtz-Zentrum für Infektionsforschung GmbH
69423DSM_45727_image6.jpeg(ISP6, ISP7, SSM+T, SSM-T)Helmholtz-Zentrum für Infektionsforschung GmbH
69423DSM_45727_image8.jpeg(ISP6, ISP7, SSM+T, SSM-T)Helmholtz-Zentrum für Infektionsforschung GmbH

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
18144GPHF-MEDIUM (DSMZ Medium 553)yeshttps://mediadive.dsmz.de/medium/553Name: GPHF-MEDIUM (DSMZ Medium 553) Composition: Agar 20.0 g/l Glucose 10.0 g/l Beef extract 5.0 g/l Yeast extract 5.0 g/l Casein peptone 5.0 g/l CaCl2 x 2 H2O 0.74 g/l Distilled water
18144GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
18144ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)yeshttps://mediadive.dsmz.de/medium/84Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
18144YEAST STARCH AGAR (A) (DSMZ Medium 1027)yeshttps://mediadive.dsmz.de/medium/1027Name: YEAST STARCH AGAR (A) (DSMZ Medium 1027) Composition: Agar 15.0 g/l Starch 10.0 g/l Yeast extract 2.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
18144positivegrowth28mesophilic
30735positivegrowth18-37
30735positiveoptimum32.5mesophilic
67770positivegrowth28mesophilic

culture pH

@refabilitytypepH
30735positivegrowth5.5-7
30735positiveoptimum6.5

Physiology and metabolism

oxygen tolerance

  • @ref: 30735
  • oxygen tolerance: aerobe

spore formation

  • @ref: 30735
  • spore formation: yes

halophily

@refsaltgrowthtested relationconcentration
30735NaClpositivegrowth0-3.5 %
69423NaClpositivegrowth0-5 %

observation

@refobservation
30735aggregates in chains
67770quinones: MK-9(H4), MK-9(H6)

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6942322599arabinose+growth
3073517057cellobiose+carbon source
3073516947citrate+carbon source
3073523652dextrin+carbon source
3073528260galactose+carbon source
3073517754glycerol+carbon source
3073517716lactose+carbon source
3073529864mannitol+carbon source
3073537684mannose+carbon source
3073528053melibiose+carbon source
3073516634raffinose+carbon source
3073530911sorbitol+carbon source
3073517992sucrose+carbon source
3073527082trehalose+carbon source
3073518222xylose+carbon source
307354853esculin+hydrolysis
6942362968cellulose-growth
6942328757fructose+growth
6942317234glucose+growth
6942317268inositol+/-growth
6942337684mannose+growth
6942316634raffinose+/-growth
6942326546rhamnose+/-growth
6942317992sucrose+growth
6942318222xylose+growth
6837917632nitrate-reduction
683794853esculin-hydrolysis
6837916199urea-hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
30735catalase+1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase-3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase+3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase-3.5.1.B15
68382alkaline phosphatase+3.1.3.1
68382esterase lipase (C 8)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-fucosidase-3.2.1.51

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELGLURIBXYLMANMALLACSACGLYG
69423---+-++------------

API zym

@refAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
69423++/-++/-+++/---++-+-++++/--

Isolation, sampling and environmental information

isolation

@refsample typehost speciesgeographic locationcountryorigin.countrycontinent
18144rhizosphere soil of mangrove plant Acanthus ilicifoliusAcanthus ilicifoliusHainan province, Wenchang, TouyuanChinaCHNAsia
67770Rhizosphere soil of mangrove plant Acanthus ilicifolius at TouyuanAcanthus ilicifoliusWenchang, Hainan ProvinceChinaCHNAsia

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Mangrove
#Environmental#Terrestrial#Soil
#Host#Plants#Herbaceous plants (Grass,Crops)
#Host Body-Site#Plant#Rhizosphere

Safety information

risk assessment

  • @ref: 18144
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 18144
  • description: Actinoallomurus acanthiterrae strain 2614A723 16S ribosomal RNA gene, partial sequence
  • accession: JQ085862
  • length: 1483
  • database: ena
  • NCBI tax ID: 1136071

GC content

@refGC-contentmethod
1814471.3high performance liquid chromatography (HPLC)
3073571.3

External links

@ref: 18144

culture collection no.: DSM 45727, CCTCC AA 2012001, JCM 31201

straininfo link

  • @ref: 87553
  • straininfo: 400684

literature

  • topic: Phylogeny
  • Pubmed-ID: 23002049
  • title: Actinoallomurus acanthiterrae sp. nov., an actinomycete isolated from rhizosphere soil of the mangrove plant Acanthus ilicifolius.
  • authors: Tang YL, Lin HP, Xie QY, Li L, Peng F, Deng Z, Hong K
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.043380-0
  • year: 2012
  • mesh: Acanthaceae/*microbiology, Actinomycetales/*classification/genetics/isolation & purification, Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Diaminopimelic Acid/analysis, Fatty Acids/analysis, Molecular Sequence Data, Nucleic Acid Hybridization, Peptidoglycan, Phospholipids/analysis, *Phylogeny, Plant Roots/microbiology, RNA, Ribosomal, 16S/genetics, *Rhizosphere, Sequence Analysis, DNA, *Soil Microbiology, Vitamin K 2/analogs & derivatives/analysis
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitleID_cross_referencepubmed
18144Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45727)https://www.dsmz.de/collection/catalogue/details/culture/DSM-45727
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
30735Barberan A, Caceres Velazquez H, Jones S, Fierer N.10.1128/mSphere.00237-17Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information2706628776041
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
69423Wink, J.https://cdn.dsmz.de/wink/DSM%2045727.pdfCompendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig
87553Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID400684.1StrainInfo: A central database for resolving microbial strain identifiers