Strain identifier

BacDive ID: 23312

Type strain: No

Species: Streptomyces endophyticus

Strain history: <- S.-K. Tang, Yunnan Univ., Kunming, Yunnan Inst. Microbiol. (YIM), China; YIM 65642 <- J. Li

NCBI tax ID(s): 714166 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 19202

BacDive-ID: 23312

DSM-Number: 41986

keywords: 16S sequence, Bacteria, mesophilic

description: Streptomyces endophyticus DSM 41986 is a mesophilic bacterium that was isolated from surface-sterilized roots of Artemisia annua L..

NCBI tax id

  • NCBI tax id: 714166
  • Matching level: species

strain history

  • @ref: 19202
  • history: <- S.-K. Tang, Yunnan Univ., Kunming, Yunnan Inst. Microbiol. (YIM), China; YIM 65642 <- J. Li

doi: 10.13145/bacdive23312.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces endophyticus
  • full scientific name: Streptomyces endophyticus Li et al. 2013

@ref: 19202

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces endophyticus

full scientific name: Streptomyces endophyticus Li et al. 2013

type strain: no

Morphology

multimedia

  • @ref: 19202
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_41986.jpg
  • caption: Medium 553 28°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

  • @ref: 19202
  • name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/65
  • composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

  • @ref: 19202
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 19202
  • sample type: surface-sterilized roots of Artemisia annua L.
  • host species: Artemisia annua
  • geographic location: Yunnan province
  • country: China
  • origin.country: CHN
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Host#Plants#Herbaceous plants (Grass,Crops)
#Host Body-Site#Plant#Root (Rhizome)
#Host Body-Site#Plant#Sterilized plant part

Safety information

risk assessment

  • @ref: 19202
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 19202
  • description: Streptomyces endophyticus strain YIM 65642 16S ribosomal RNA gene, partial sequence
  • accession: GU367159
  • length: 1422
  • database: ena
  • NCBI tax ID: 714166

GC content

  • @ref: 19202
  • GC-content: 72
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 19202

culture collection no.: DSM 41986, YIM 65642

straininfo link

  • @ref: 87530
  • straininfo: 398776

literature

  • topic: Phylogeny
  • Pubmed-ID: 22389285
  • title: Streptomyces endophyticus sp. nov., an endophytic actinomycete isolated from Artemisia annua L.
  • authors: Li J, Zhao GZ, Zhu WY, Huang HY, Xu LH, Zhang S, Li WJ
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.035725-0
  • year: 2012
  • mesh: Artemisia annua/*microbiology, China, DNA, Bacterial/genetics, Fatty Acids/analysis, Molecular Sequence Data, Nucleic Acid Hybridization, *Phylogeny, Plant Roots/*microbiology, RNA, Ribosomal, 16S/genetics, Streptomyces/*classification/genetics/isolation & purification, Vitamin K 2/analogs & derivatives/analysis
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitle
19202Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 41986)https://www.dsmz.de/collection/catalogue/details/culture/DSM-41986
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
87530Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID398776.1StrainInfo: A central database for resolving microbial strain identifiers