Strain identifier
BacDive ID: 23312
Type strain:
Species: Streptomyces endophyticus
Strain history: <- S.-K. Tang, Yunnan Univ., Kunming, Yunnan Inst. Microbiol. (YIM), China; YIM 65642 <- J. Li
NCBI tax ID(s): 714166 (species)
General
@ref: 19202
BacDive-ID: 23312
DSM-Number: 41986
keywords: 16S sequence, Bacteria, mesophilic
description: Streptomyces endophyticus DSM 41986 is a mesophilic bacterium that was isolated from surface-sterilized roots of Artemisia annua L..
NCBI tax id
- NCBI tax id: 714166
- Matching level: species
strain history
- @ref: 19202
- history: <- S.-K. Tang, Yunnan Univ., Kunming, Yunnan Inst. Microbiol. (YIM), China; YIM 65642 <- J. Li
doi: 10.13145/bacdive23312.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces endophyticus
- full scientific name: Streptomyces endophyticus Li et al. 2013
@ref: 19202
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces endophyticus
full scientific name: Streptomyces endophyticus Li et al. 2013
type strain: no
Morphology
multimedia
- @ref: 19202
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_41986.jpg
- caption: Medium 553 28°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
- @ref: 19202
- name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
- growth: yes
- link: https://mediadive.dsmz.de/medium/65
- composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
culture temp
- @ref: 19202
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 19202
- sample type: surface-sterilized roots of Artemisia annua L.
- host species: Artemisia annua
- geographic location: Yunnan province
- country: China
- origin.country: CHN
- continent: Asia
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Plants | #Herbaceous plants (Grass,Crops) |
#Host Body-Site | #Plant | #Root (Rhizome) |
#Host Body-Site | #Plant | #Sterilized plant part |
Safety information
risk assessment
- @ref: 19202
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 19202
- description: Streptomyces endophyticus strain YIM 65642 16S ribosomal RNA gene, partial sequence
- accession: GU367159
- length: 1422
- database: ena
- NCBI tax ID: 714166
GC content
- @ref: 19202
- GC-content: 72
- method: high performance liquid chromatography (HPLC)
External links
@ref: 19202
culture collection no.: DSM 41986, YIM 65642
straininfo link
- @ref: 87530
- straininfo: 398776
literature
- topic: Phylogeny
- Pubmed-ID: 22389285
- title: Streptomyces endophyticus sp. nov., an endophytic actinomycete isolated from Artemisia annua L.
- authors: Li J, Zhao GZ, Zhu WY, Huang HY, Xu LH, Zhang S, Li WJ
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.035725-0
- year: 2012
- mesh: Artemisia annua/*microbiology, China, DNA, Bacterial/genetics, Fatty Acids/analysis, Molecular Sequence Data, Nucleic Acid Hybridization, *Phylogeny, Plant Roots/*microbiology, RNA, Ribosomal, 16S/genetics, Streptomyces/*classification/genetics/isolation & purification, Vitamin K 2/analogs & derivatives/analysis
- topic2: Genetics
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
19202 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 41986) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-41986 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
87530 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID398776.1 | StrainInfo: A central database for resolving microbial strain identifiers |