General

@ref: 19086

BacDive-ID: 23245

DSM-Number: 19390

keywords: 16S sequence, Bacteria, mesophilic

description: Zoogloea caeni EMB61 is a mesophilic bacterium that was isolated from activated sludge, domestic wastewater treatment plant.

NCBI tax id

• NCBI tax id: 374858
• Matching level: species

strain history

• @ref: 19086
• history: <- C. O. Jeon, Gyeongsang Natl. Univ. (GNU), Jinju, Korea; EMB61

doi: 10.13145/bacdive23245.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/pseudomonadota
• domain: Bacteria
• phylum: Pseudomonadota
• class: Betaproteobacteria
• order: Rhodocyclales
• family: Zoogloeaceae
• genus: Zoogloea
• species: Zoogloea caeni
• full scientific name: Zoogloea caeni Shao et al. 2009

@ref: 19086

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Rhizobiales

family: Zoogloeaceae

genus: Zoogloea

species: Zoogloea caeni

full scientific name: Zoogloea caeni Shao et al. 2009

strain designation: EMB61

type strain: no

Culture and growth conditions

culture medium

• @ref: 19086
• name: R2A MEDIUM (DSMZ Medium 830)
• growth: yes
• link: https://mediadive.dsmz.de/medium/830
• composition: Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water

culture temp

• @ref: 19086
• growth: positive
• type: growth
• temperature: 28
• range: mesophilic

Isolation, sampling and environmental information

isolation

• @ref: 19086
• sample type: activated sludge, domestic wastewater treatment plant
• geographic location: Pohang
• country: Republic of Korea
• origin.country: KOR
• continent: Asia

isolation source categories

taxonmaps

• @ref: 69479
• File name: preview.99_49192.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_129;96_3402;97_4177;98_10230;99_49192&stattab=map
• Last taxonomy: Zoogloea caeni subclade
• 16S sequence: DQ413150
• Sequence Identity:
• Total samples: 680
• soil counts: 8
• aquatic counts: 570
• animal counts: 94
• plant counts: 8

Safety information

risk assessment

• @ref: 19086
• biosafety level: 1
• biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

• @ref: 19086
• description: Zoogloea caeni strain EMB 61 16S ribosomal RNA gene, partial sequence
• accession: DQ413150
• length: 1460
• database: ena
• NCBI tax ID: 374858

External links

@ref: 19086

culture collection no.: DSM 19390

straininfo link

• @ref: 87471
• straininfo: 397305

literature

• topic: Phylogeny
• Pubmed-ID: 19244434
• title: Zoogloea caeni sp. nov., a floc-forming bacterium isolated from activated sludge.
• authors: Shao Y, Chung BS, Lee SS, Park W, Lee SS, Jeon CO
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijs.0.65670-0
• year: 2009
• mesh: Bacterial Typing Techniques, Base Composition, DNA, Bacterial, DNA, Ribosomal, Flocculation, Genes, rRNA, Korea, Molecular Sequence Data, Nitrogen Fixation, Nucleic Acid Hybridization, Phenotype, Phylogeny, RNA, Ribosomal, 16S, Sequence Analysis, DNA, Sewage/*microbiology, Species Specificity, Waste Disposal, Fluid/*methods, Zoogloea/*classification/genetics/isolation & purification/physiology
• topic2: Genetics

Reference