Strain identifier

BacDive ID: 23221

Type strain: Yes

Species: Actinomycetospora rishiriensis

Strain Designation: RI109-Li102

Culture col. no.: DSM 45862, KCTC 19782, NBRC 106356

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 19125

BacDive-ID: 23221

DSM-Number: 45862

keywords: Bacteria, 16S sequence, mesophilic

description: Actinomycetospora rishiriensis RI109-Li102 is a mesophilic bacterium that was isolated from lichen.

strain history: <- NBRC; NBRC 106356 <- M. Hayakawa, Univ. Yamanashi; RI109-Li102

doi: 10.13145/bacdive23221.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinobacteria
  • domain: Bacteria
  • phylum: Actinobacteria
  • class: Actinobacteria
  • order: Pseudonocardiales
  • family: Pseudonocardiaceae
  • genus: Actinomycetospora
  • species: Actinomycetospora rishiriensis
  • full scientific name: Actinomycetospora rishiriensis Yamamura et al. 2011

@ref: 19125

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Pseudonocardiaceae

genus: Actinomycetospora

species: Actinomycetospora rishiriensis

full scientific name: Actinomycetospora rishiriensis Yamamura et al. 2011

strain designation: RI109-Li102

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 19125
  • name: GPHF-MEDIUM (DSMZ Medium 553)
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium553.pdf

culture temp

  • @ref: 19125
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 19125
  • sample type: lichen
  • geographic location: Rishiri, Hokkaido
  • country: Japan
  • origin.country: JPN
  • continent: Asia

isolation source categories

  • Cat1: #Host
  • Cat2: #Plants
  • Cat3: #Lichen

Safety information

risk assessment

  • @ref: 19125
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 19125
  • description: Actinomycetospora rishiriensis gene for 16S ribosomal RNA, partial sequence
  • accession: AB581530
  • length: 1468
  • database: ena
  • NCBI tax ID: 878212

GC content

  • @ref: 19125
  • GC-content: 73.1

External links

@ref: 19125

culture collection no.: DSM 45862, KCTC 19782, NBRC 106356

straininfo link

@refpassport
20218http://www.straininfo.net/strains/867599
20218http://www.straininfo.net/strains/867600

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
19125Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45862)https://www.dsmz.de/collection/catalogue/details/culture/DSM-45862
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274