General

@ref: 19277

BacDive-ID: 23181

DSM-Number: 24983

keywords: 16S sequence, Bacteria, mesophilic

description: Paenibacillus brassicae 112 is a mesophilic bacterium that was isolated from cabbage rhizosphere.

NCBI tax id

• NCBI tax id: 1126832
• Matching level: species

strain history

• @ref: 19277
• history: <- M. Gao, Agric. Cult. Coll. of China, Inst. Agric. Res. and Regional Planning, Chinese Academy of Agric. Sci., Beijing, PR China; strain 112

doi: 10.13145/bacdive23181.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/bacillota
• domain: Bacteria
• phylum: Bacillota
• class: Bacilli
• order: Caryophanales
• family: Paenibacillaceae
• genus: Paenibacillus
• species: Paenibacillus brassicae
• full scientific name: Paenibacillus brassicae Gao et al. 2013

@ref: 19277

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Paenibacillaceae

genus: Paenibacillus

species: Paenibacillus brassicae

full scientific name: Paenibacillus brassicae Gao et al. 2013

strain designation: 112

type strain: yes

Culture and growth conditions

culture medium

• @ref: 19277
• name: CASO AGAR (MERCK 105458) (DSMZ Medium 220)
• growth: yes
• link: https://mediadive.dsmz.de/medium/220
• composition: Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water

culture temp

• @ref: 19277
• growth: positive
• type: growth
• temperature: 30
• range: mesophilic

Isolation, sampling and environmental information

isolation

• @ref: 19277
• sample type: cabbage rhizosphere
• geographic location: Beijing
• country: China
• origin.country: CHN
• continent: Asia

isolation source categories

Sequence information

16S sequences

• @ref: 19277
• description: Paenibacillus brassicae strain 112T 16S ribosomal RNA gene, partial sequence
• accession: JN408294
• length: 1512
• database: ena
• NCBI tax ID: 1126832

GC content

• @ref: 19277
• GC-content: 55.4
• method: high performance liquid chromatography (HPLC)

External links

@ref: 19277

culture collection no.: DSM 24983, ACCC 01125

literature

• topic: Phylogeny
• Pubmed-ID: 23180372
• title: Paenibacillus brassicae sp. nov., isolated from cabbage rhizosphere in Beijing, China.
• authors: Gao M, Yang H, Zhao J, Liu J, Sun YH, Wang YJ, Sun JG
• journal: Antonie Van Leeuwenhoek
• DOI: 10.1007/s10482-012-9849-1
• year: 2012
• mesh: Bacterial Typing Techniques, Brassica/*microbiology, China, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Hydrogen-Ion Concentration, Locomotion, Molecular Sequence Data, Nucleic Acid Hybridization, Paenibacillus/*classification/genetics/*isolation & purification/physiology, Phospholipids/analysis, Phylogeny, Plant Roots/*microbiology, RNA, Ribosomal, 16S/genetics, Rhizosphere, Sequence Analysis, DNA, Sequence Homology, Nucleic Acid, *Soil Microbiology, Spores, Bacterial/cytology, Temperature, Vitamin K 2/analysis
• topic2: Genetics

Reference