Strain identifier
BacDive ID: 23158
Type strain: 
Species: Nocardia aciditolerans
Strain Designation: A2SCA68
Strain history: <- P. Golinska, Univ. Newcastle, Newcastle upon Tyne, UK; A2SCA68
NCBI tax ID(s): 1224718 (species)
General
@ref: 19329
BacDive-ID: 23158
DSM-Number: 45801
keywords: 16S sequence, Bacteria, mesophilic
description: Nocardia aciditolerans A2SCA68 is a mesophilic bacterium that was isolated from spruce forest soil.
NCBI tax id
- NCBI tax id: 1224718
- Matching level: species
strain history
- @ref: 19329
- history: <- P. Golinska, Univ. Newcastle, Newcastle upon Tyne, UK; A2SCA68
doi: 10.13145/bacdive23158.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Mycobacteriales
- family: Nocardiaceae
- genus: Nocardia
- species: Nocardia aciditolerans
- full scientific name: Nocardia aciditolerans Golinska et al. 2013
@ref: 19329
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Nocardiaceae
genus: Nocardia
species: Nocardia aciditolerans
full scientific name: Nocardia aciditolerans Golinska et al. 2013
strain designation: A2SCA68
type strain: yes
Culture and growth conditions
culture medium
- @ref: 19329
- name: ISP2 MEDIUM (DSMZ Medium 987)
- growth: yes
- link: https://mediadive.dsmz.de/medium/987
- composition: Name: ISP 2 MEDIUM (DSMZ Medium 987) Composition: Agar 20.0 g/l Malt extract 10.0 g/l Dextrose 4.0 g/l Yeast extract 4.0 g/l Distilled water
culture temp
- @ref: 19329
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 19329
- sample type: spruce forest soil
- geographic location: County Durham, Hamsterley Forest
- country: United Kingdom
- origin.country: GBR
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Terrestrial | #Forest |
| #Environmental | #Terrestrial | #Soil |
| #Host | #Plants | #Tree |
Safety information
risk assessment
- @ref: 19329
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 19329
- description: Nocardia aciditolerans strain CSCA68 16S ribosomal RNA gene, partial sequence
- accession: JX484797
- length: 1451
- database: ena
- NCBI tax ID: 1224718
GC content
- @ref: 19329
- GC-content: 71.3
- method: fluorimetric
External links
@ref: 19329
culture collection no.: DSM 45801, KACC 17155, NCIMB 14829, CSCA 68
straininfo link
- @ref: 87392
- straininfo: 398815
literature
- topic: Phylogeny
- Pubmed-ID: 23371034
- title: Nocardia aciditolerans sp. nov., isolated from a spruce forest soil.
- authors: Golinska P, Wang D, Goodfellow M
- journal: Antonie Van Leeuwenhoek
- DOI: 10.1007/s10482-013-9887-3
- year: 2013
- mesh: Bacterial Typing Techniques, Cluster Analysis, Culture Media/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Hydrogen-Ion Concentration, Molecular Sequence Data, Nocardia/*classification/genetics/*isolation & purification/physiology, Nucleic Acid Hybridization, Phylogeny, Picea/growth & development, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Trees
- topic2: Genetics
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 19329 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45801) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-45801 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 87392 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID398815.1 | StrainInfo: A central database for resolving microbial strain identifiers |