Strain identifier
BacDive ID: 23101
Type strain: 
Species: Leucobacter kyeonggiensis
Strain Designation: F3-P9
Strain history: S.-S. Lee F3-P9.
NCBI tax ID(s): 1123558 (species)
version 9.2 (current version)
General
@ref: 19239
BacDive-ID: 23101
DSM-Number: 26691
keywords: 16S sequence, Bacteria, mesophilic
description: Leucobacter kyeonggiensis F3-P9 is a mesophilic bacterium that was isolated from aeration tank of a textile dye wastewater treatment system.
NCBI tax id
- NCBI tax id: 1123558
- Matching level: species
strain history
| @ref | history |
|---|---|
| 19239 | <- JCM <- S.-S. Lee; F3-P9 |
| 67770 | S.-S. Lee F3-P9. |
doi: 10.13145/bacdive23101.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micrococcales
- family: Microbacteriaceae
- genus: Leucobacter
- species: Leucobacter kyeonggiensis
- full scientific name: Leucobacter kyeonggiensis Kim and Lee 2011
@ref: 19239
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Microbacteriaceae
genus: Leucobacter
species: Leucobacter kyeonggiensis
full scientific name: Leucobacter kyeonggiensis Kim and Lee 2011
strain designation: F3-P9
type strain: no
Culture and growth conditions
culture medium
- @ref: 19239
- name: R2A MEDIUM (DSMZ Medium 830)
- growth: yes
- link: https://mediadive.dsmz.de/medium/830
- composition: Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 19239 | positive | growth | 28 |
| 67770 | positive | growth | 28 |
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: MK-11, MK-9, MK-10
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 19239 | aeration tank of a textile dye wastewater treatment system | Gyeonggi-do | Republic of Korea | KOR | Asia |
| 67770 | Aeration tank of a textile dye wastewater treatment system | Gyeonggi-do | Republic of Korea | KOR | Asia |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Built environment | #Container (Reservoir) |
| #Engineered | #Waste | #Industrial wastewater |
taxonmaps
- @ref: 69479
- File name: preview.99_71044.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_9;96_1203;97_3971;98_5069;99_71044&stattab=map
- Last taxonomy: Leucobacter
- 16S sequence: JQ039895
- Sequence Identity:
- Total samples: 180
- soil counts: 14
- aquatic counts: 84
- animal counts: 69
- plant counts: 13
Sequence information
16S sequences
- @ref: 19239
- description: Leucobacter kyeonggiensis strain F3-P9 16S ribosomal RNA gene, partial sequence
- accession: JQ039895
- length: 1432
- database: nuccore
- NCBI tax ID: 1123558
GC content
- @ref: 19239
- GC-content: 67.5
- method: high performance liquid chromatography (HPLC)
External links
@ref: 19239
culture collection no.: DSM 26691, JCM 17539, KACC 16572, KEMC 211-128
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 22203572 | Leucobacter kyeonggiensis sp. nov., a new species isolated from dye waste water. | Kim HJ, Lee SS | J Microbiol | 10.1007/s12275-011-1548-5 | 2011 | Actinomycetales/*classification/genetics/*isolation & purification/metabolism, Base Composition, Coloring Agents/metabolism, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Fatty Acids/metabolism, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Sewage/*microbiology | Metabolism |
| Phylogeny | 26420495 | Leucobacter zeae sp. nov., isolated from the rhizosphere of maize (Zea mays L.). | Lai WA, Lin SY, Hameed A, Hsu YH, Liu YC, Huang HR, Shen FT, Young CC | Int J Syst Evol Microbiol | 10.1099/ijsem.0.000640 | 2015 | Actinomycetales/*classification/genetics/isolation & purification, Aminobutyrates/chemistry, Bacterial Typing Techniques, Base Composition, Cell Wall/chemistry, DNA, Bacterial/genetics, Fatty Acids/chemistry, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, Pigmentation, RNA, Ribosomal, 16S/genetics, *Rhizosphere, Sequence Analysis, DNA, *Soil Microbiology, Taiwan, Vitamin K 2/chemistry, Zea mays/*microbiology | Genetics |
| Phylogeny | 26869452 | Description of Leucobacter holotrichiae sp. nov., isolated from the gut of Holotrichia oblita larvae. | Zhu D, Zhang P, Li P, Wu J, Xie C, Sun J, Niu L | Int J Syst Evol Microbiol | 10.1099/ijsem.0.000957 | 2016 | Actinomycetales/*classification/genetics/isolation & purification, Animals, Bacterial Typing Techniques, Base Composition, China, Coleoptera/*microbiology, DNA, Bacterial/genetics, Fatty Acids/chemistry, Gastrointestinal Tract/*microbiology, Glycolipids/chemistry, Larva, Molecular Sequence Data, Nucleic Acid Hybridization, Peptidoglycan/chemistry, Phospholipids/chemistry, *Phylogeny, Pigmentation, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Vitamin K 2/chemistry | Genetics |
| Phylogeny | 26971343 | Leucobacter populi sp. nov. isolated from a symptomatic bark of Populus x euramericana canker. | Fang W, Li X, Tan XM, Wang LF, Piao CG, Li Y | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001020 | 2016 | Actinobacteria/*classification/genetics/isolation & purification, Aminobutyrates/chemistry, Bacterial Typing Techniques, Base Composition, Cell Wall/chemistry, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Glycolipids/chemistry, Phospholipids/chemistry, *Phylogeny, Plant Bark/*microbiology, Populus/*microbiology, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA | Transcriptome |
| Phylogeny | 28699860 | Leucobacter corticis sp. nov., isolated from symptomatic bark of Populus x euramericana canker. | Li Y, Fang W, Xie SJ, Yang X, Wang LF | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001934 | 2017 | Actinomycetales/*classification/genetics/isolation & purification, Aminobutyrates/chemistry, Bacterial Typing Techniques, Cell Wall/chemistry, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Glycolipids/chemistry, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, Plant Bark/*microbiology, Plant Diseases/*microbiology, Populus/*microbiology, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Vitamin K 2/chemistry | Transcriptome |
| Phylogeny | 29139349 | Leucobacter triazinivorans sp. nov., a s-triazine herbicide prometryn-degrading bacterium isolated from sludge. | Sun LN, Pan DD, Wu XW, Yang ED, Hua RM, Li QX | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002483 | 2017 | Actinomycetales/*classification/genetics/isolation & purification, Aminobutyrates, Bacterial Typing Techniques, Base Composition, Cell Wall/chemistry, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Glycolipids/chemistry, Herbicides/*metabolism, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, Prometryne/*metabolism, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sewage/*microbiology, Vitamin K 2/chemistry | Metabolism |
| Phylogeny | 31099739 | Leucobacter muris sp. nov., isolated from the nose of a laboratory mouse. | Benga L, Sproer C, Schumann P, Verbarg S, Bunk B, Engelhardt E, Benten WPM, Sager M | Int J Syst Evol Microbiol | 10.1099/ijsem.0.003446 | 2019 | Actinobacteria/*classification/isolation & purification, Animals, Animals, Laboratory/microbiology, Bacterial Typing Techniques, Base Composition, Cell Wall/chemistry, DNA, Bacterial/genetics, Fatty Acids/chemistry, Germany, Glycolipids/chemistry, Mice/*microbiology, Nose/*microbiology, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Vitamin K 2/chemistry | Transcriptome |
| Phylogeny | 34319867 | Leucobacter chromiisoli sp. nov., isolated from chromium-containing chemical plant soil. | Xu Z, Li X, Tian J, Gan L, Tian Y | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004923 | 2021 | Actinobacteria/*classification/isolation & purification, Bacterial Typing Techniques, Base Composition, China, *Chromium, DNA, Bacterial/genetics, Fatty Acids/chemistry, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, *Soil Pollutants, Vitamin K 2/chemistry | Transcriptome |
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 19239 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26691) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-26691 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta |