Strain identifier

BacDive ID: 23073

Type strain: Yes

Species: Lactiplantibacillus xiangfangensis

Strain Designation: 3.1.1

Strain history: LMG 26013 <-- C. T. Gu; Northeast Agric. Univ., China; 3.1.1.

NCBI tax ID(s): 942150 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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@ref: 19139

BacDive-ID: 23073

DSM-Number: 27103

keywords: Gram-positive, mesophilic, microaerophile, Bacteria, 16S sequence, genome sequence, rod-shaped

description: Lactiplantibacillus xiangfangensis 3.1.1 is a microaerophile, mesophilic, Gram-positive bacterium that was isolated from pickle.

NCBI tax id

  • NCBI tax id: 942150
  • Matching level: species

strain history

doi: 10.13145/bacdive23073.20220920.7

Name and taxonomic classification


  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Lactobacillaceae
  • genus: Lactiplantibacillus
  • species: Lactiplantibacillus xiangfangensis
  • full scientific name: Lactiplantibacillus xiangfangensis (Gu et al. 2012) Zheng et al. 2020
  • synonyms

    • @ref: 20215
    • synonym: Lactobacillus xiangfangensis

@ref: 19139

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Lactobacillaceae

genus: Lactiplantibacillus

species: Lactiplantibacillus xiangfangensis

full scientific name: Lactiplantibacillus xiangfangensis (Gu et al. 2012) Zheng et al. 2020

strain designation: 3.1.1

type strain: yes


cell morphology

  • @ref: 30238
  • gram stain: positive
  • cell shape: rod-shaped

Culture and growth conditions

culture medium

  • @ref: 19139
  • name: MRS MEDIUM (DSMZ Medium 11)
  • growth: yes
  • link:
  • composition: Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water

culture temp


Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
30238facultative anaerobe

spore formation

  • @ref: 30238
  • spore formation: no

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3023815963ribitol+carbon source
3023817057cellobiose+carbon source
3023828757fructose+carbon source
3023828260galactose+carbon source
3023817234glucose+carbon source
3023817306maltose+carbon source
3023829864mannitol+carbon source
3023837684mannose+carbon source
30238506227N-acetylglucosamine+carbon source
3023833942ribose+carbon source
3023817814salicin+carbon source
3023830911sorbitol+carbon source
3023817992sucrose+carbon source
3023827082trehalose+carbon source
3023818222xylose+carbon source
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
6837124265gluconate-builds acid from
6837118403L-arabitol-builds acid from
6837118333D-arabitol-builds acid from
6837118287L-fucose-builds acid from
6837128847D-fucose-builds acid from
6837116443D-tagatose-builds acid from
6837162318D-lyxose-builds acid from
6837132528turanose-builds acid from
6837117151xylitol-builds acid from
6837128087glycogen-builds acid from
6837128017starch-builds acid from
6837116634raffinose-builds acid from
683716731melezitose-builds acid from
6837115443inulin-builds acid from
6837127082trehalose+builds acid from
6837117992sucrose+builds acid from
6837128053melibiose-builds acid from
6837117716lactose-builds acid from
6837117306maltose+builds acid from
6837117057cellobiose+builds acid from
6837117814salicin+builds acid from
683714853esculin+builds acid from
6837118305arbutin-builds acid from
6837127613amygdalin-builds acid from
6837159640N-acetylglucosamine+builds acid from
68371320061methyl alpha-D-glucopyranoside-builds acid from
6837143943methyl alpha-D-mannoside-builds acid from
6837117924D-sorbitol+builds acid from
6837116899D-mannitol+builds acid from
6837117268myo-inositol-builds acid from
6837116813galactitol-builds acid from
6837162345L-rhamnose-builds acid from
6837117266L-sorbose-builds acid from
6837116024D-mannose+builds acid from
6837115824D-fructose+builds acid from
6837117634D-glucose+builds acid from
6837112936D-galactose-builds acid from
6837174863methyl beta-D-xylopyranoside-builds acid from
6837115963ribitol-builds acid from
6837165328L-xylose-builds acid from
6837165327D-xylose-builds acid from
6837116988D-ribose-builds acid from
6837130849L-arabinose-builds acid from
6837117108D-arabinose-builds acid from
6837117113erythritol-builds acid from
6837117754glycerol-builds acid from

API 50CHac


Isolation, sampling and environmental information


@refsample typegeographic locationcountryorigin.countrycontinent
19139pickleHeilongjiang Province, HarbinChinaCHNAsia
67770Chinese pickleHeilongjiang ProvinceChinaCHNAsia

isolation source categories

  • Cat1: #Engineered
  • Cat2: #Food production
  • Cat3: #Food

Safety information

risk assessment

  • @ref: 19139
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 19139
  • description: Lactobacillus xiangfangensis strain 3.1.1 16S ribosomal RNA gene, partial sequence
  • accession: HM443954
  • length: 1447
  • database: ena
  • NCBI tax ID: 942150

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Lactiplantibacillus xiangfangensis LMG 26013GCA_001438845scaffoldncbi942150
66792Lactobacillus xiangfangensis strain LMG 26013942150.3wgspatric942150
66792Lactiplantibacillus xiangfangensis LMG 260132700989271draftimg942150
67770Lactiplantibacillus xiangfangensis strain LMG 26013, whole genome shotgun sequencing projectJQCL00000000ncbi942150

GC content

6777045.1genome sequence analysis
6777046.6thermal denaturation, midpoint method (Tm)

External links

@ref: 19139

culture collection no.: DSM 27103, LMG 26013, NCIMB 14687, JCM 30915, KCTC 21028, NBRC 108914

straininfo link



Phylogeny21622835Lactobacillus xiangfangensis sp. nov., isolated from Chinese pickle.Gu CT, Wang F, Li CY, Liu F, Huo GCInt J Syst Evol Microbiol10.1099/ijs.0.031468-02011Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Fermentation, *Food Microbiology, Lactobacillus/*classification/genetics/isolation & purification, Molecular Sequence Data, Nucleic Acid Hybridization, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNABiotechnology
Phylogeny23950151Lactobacillus mudanjiangensis sp. nov., Lactobacillus songhuajiangensis sp. nov. and Lactobacillus nenjiangensis sp. nov., isolated from Chinese traditional pickle and sourdough.Gu CT, Li CY, Yang LJ, Huo GCInt J Syst Evol Microbiol10.1099/ijs.0.054296-02013Bacterial Typing Techniques, Base Composition, Bread/microbiology, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Fermentation, *Food Microbiology, Genes, Bacterial, Lactobacillus/*classification/genetics/isolation & purification, Molecular Sequence Data, Nucleic Acid Hybridization, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Vegetables/microbiologyBiotechnology
Phylogeny32228805Lactobacillus garii sp. nov., isolated from a fermented cassava product.Diaz M, Sayavedra L, Atter A, Mayer MJ, Saha S, Amoa-Awua W, Narbad AInt J Syst Evol Microbiol10.1099/ijsem.0.0041212020Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Fermented Foods/*microbiology, *Food Microbiology, Genes, Bacterial, Ghana, Lactobacillus/*classification/isolation & purification, Manihot/*microbiology, Nucleic Acid Hybridization, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNABiotechnology


19139Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 27103)
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
30238Barberan A, Caceres Velazquez H, Jones S, Fierer N.10.1128/mSphere.00237-17Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information2877604126580
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
67770Curators of the JCM
68371Automatically annotated from API 50CH acid