Strain identifier
BacDive ID: 22987
Type strain: 
Species: Barrientosiimonas marina
Strain Designation: MSW-24
Culture col. no.: DSM 21415, JCM 19562, KCTC 19485
General
@ref: 19332
BacDive-ID: 22987
DSM-Number: 21415
keywords: gram-positive, mesophilic, aerobe, Bacteria, 16S sequence, coccus-shaped
description: Barrientosiimonas marina MSW-24 is an aerobe, mesophilic, gram-positive bacterium that was isolated from seawater.
strain history: <- S. D. Lee, Jeju National Univ., Rep. of Korea; MSW-24
doi: 10.13145/bacdive22987.20201210.5
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinobacteria
- domain: Bacteria
- phylum: Actinobacteria
- class: Actinobacteria
- order: Micrococcales
- family: Dermacoccaceae
- genus: Barrientosiimonas
- species: Barrientosiimonas marina
- full scientific name: Barrientosiimonas marina (Lee 2013) Parag et al. 2015
synonyms
- @ref: 20215
- synonym: Tamlicoccus marinus
@ref: 19332
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Dermacoccaceae
genus: Barrientosiimonas
species: Barrientosiimonas marina
full scientific name: Barrientosiimonas marina (Lee 2013) Parag et al. 2015
strain designation: MSW-24
type strain: yes
Morphology
cell morphology
- @ref: 30725
- gram stain: positive
- cell length: 0.55 µm
- cell width: 0.55 µm
- cell shape: coccus-shaped
- motility: no
pigmentation
- @ref: 30725
- production: yes
Culture and growth conditions
culture medium
- @ref: 19332
- name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
- growth: yes
- link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium514.pdf
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 19332 | positive | growth | 28 | mesophilic |
| 30725 | positive | growth | 20-42 | |
| 30725 | positive | optimum | 30 | mesophilic |
culture pH
| @ref | ability | type | pH |
|---|---|---|---|
| 30725 | positive | growth | 05-12 |
| 30725 | positive | optimum | 8.5 |
Physiology and metabolism
oxygen tolerance
- @ref: 30725
- oxygen tolerance: aerobe
spore formation
- @ref: 30725
- spore formation: no
halophily
| @ref | salt | growth | tested relation | concentration |
|---|---|---|---|---|
| 30725 | NaCl | positive | growth | 0-8 % |
| 30725 | NaCl | positive | optimum | 3 % |
observation
- @ref: 30725
- observation: aggregates in clumps
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 30725 | 17128 | adipate | + | carbon source |
| 30725 | 17234 | glucose | + | carbon source |
| 30725 | 17306 | maltose | + | carbon source |
| 30725 | 29864 | mannitol | + | carbon source |
| 30725 | 17632 | nitrate | + | reduction |
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 30725 | acid phosphatase | + | 3.1.3.2 |
| 30725 | alkaline phosphatase | + | 3.1.3.1 |
| 30725 | catalase | + | 1.11.1.6 |
| 30725 | gelatinase | + |
Isolation, sampling and environmental information
isolation
- @ref: 19332
- sample type: seawater
- geographic location: Mara Island, Jeju (33° 06' N 126° 16' E)
- country: Republic of Korea
- origin.country: KOR
- continent: Asia
isolation source categories
- Cat1: #Environmental
- Cat2: #Aquatic
- Cat3: #Marine
Safety information
risk assessment
- @ref: 19332
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 19332
- description: Tamlicoccus marinus MSW-24 partial 16S rRNA gene, type strain MSW-24T
- accession: HE792770
- length: 1433
- database: ena
- NCBI tax ID: 1163776
GC content
| @ref | GC-content | method |
|---|---|---|
| 19332 | 71 | high performance liquid chromatography (HPLC) |
| 30725 | 71 |
External links
@ref: 19332
culture collection no.: DSM 21415, JCM 19562, KCTC 19485
straininfo link
| @ref | passport |
|---|---|
| 20218 | http://www.straininfo.net/strains/887411 |
| 20218 | http://www.straininfo.net/strains/887412 |
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed | ID_cross_reference |
|---|---|---|---|---|---|---|---|
| 19332 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 21415) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-21415 | ||||
| 20215 | D.Gleim, M.Kracht, N.Weiss et. al. | http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.html | Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since | ||||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | ||
| 27056 | 10.1099/ijs.0.043117-0 | ||||||
| 30725 | Barberan A, Caceres Velazquez H, Jones S, Fierer N. | 10.1128/mSphere.00237-17 | Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information | 27056 |