Strain identifier

BacDive ID: 22910

Type strain: Yes

Species: Anoxybacillus kaynarcensis

Strain Designation: D1021

Strain history: <- A. O. Belduz, Karadeniz Techn. Univ., Trabzon, Turkey; D1021 <- K. Inan

NCBI tax ID(s): 1173302 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 19275

BacDive-ID: 22910

DSM-Number: 21706

keywords: 16S sequence, Bacteria, thermophilic

description: Anoxybacillus kaynarcensis D1021 is a thermophilic bacterium that was isolated from hot spring.

NCBI tax id

  • NCBI tax id: 1173302
  • Matching level: species

strain history

  • @ref: 19275
  • history: <- A. O. Belduz, Karadeniz Techn. Univ., Trabzon, Turkey; D1021 <- K. Inan

doi: 10.13145/bacdive22910.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Anoxybacillus
  • species: Anoxybacillus kaynarcensis
  • full scientific name: Anoxybacillus kaynarcensis Inan et al. 2013

@ref: 19275

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Bacillaceae

genus: Anoxybacillus

species: Anoxybacillus kaynarcensis

full scientific name: Anoxybacillus kaynarcensis Inan et al. 2013

strain designation: D1021

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
19275NUTRIENT AGAR (DSMZ Medium 1)yeshttps://mediadive.dsmz.de/medium/1Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
19275CASO AGAR (MERCK 105458) (DSMZ Medium 220)yeshttps://mediadive.dsmz.de/medium/220Name: CASO AGAR (Merck 105458) (DSMZ Medium 220; with strain-specific modifications) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l MnSO4 0.01 g/l Distilled water

culture temp

  • @ref: 19275
  • growth: positive
  • type: growth
  • temperature: 55
  • range: thermophilic

Physiology and metabolism

compound production

  • @ref: 19275
  • compound: xylanase

Isolation, sampling and environmental information

isolation

  • @ref: 19275
  • sample type: hot spring
  • geographic location: Izmir, Dikili-Bergama, Kaynarca hot spring
  • country: Turkey
  • origin.country: TUR
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Thermal spring
#Condition#Thermophilic (>45°C)

Safety information

risk assessment

  • @ref: 19275
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 19275
  • description: Anoxybacillus kaynarcensis strain D1021 16S ribosomal RNA gene, partial sequence
  • accession: EU926955
  • length: 1430
  • database: ena
  • NCBI tax ID: 1173302

GC content

  • @ref: 19275
  • GC-content: 42.9
  • method: thermal denaturation, midpoint method (Tm)

External links

@ref: 19275

culture collection no.: DSM 21706, LMG 25303

straininfo link

  • @ref: 87158
  • straininfo: 362634

literature

  • topic: Phylogeny
  • Pubmed-ID: 22736500
  • title: Anoxybacillus kaynarcensis sp. nov., a moderately thermophilic, xylanase producing bacterium.
  • authors: Inan K, Belduz AO, Canakci S
  • journal: J Basic Microbiol
  • DOI: 10.1002/jobm.201100638
  • year: 2012
  • mesh: Anoxybacillus/classification/*enzymology, Base Composition, DNA, Bacterial/metabolism, Endo-1,4-beta Xylanases/*metabolism, Hot Springs/microbiology, Hydrogen-Ion Concentration, Phylogeny, RNA, Bacterial/metabolism, RNA, Ribosomal, 16S/metabolism, Temperature
  • topic2: Metabolism

Reference

@idauthorscataloguedoi/urltitle
19275Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 21706)https://www.dsmz.de/collection/catalogue/details/culture/DSM-21706
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
87158Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID362634.1StrainInfo: A central database for resolving microbial strain identifiers