Strain identifier

BacDive ID: 2258

Type strain: Yes

Species: Carnobacterium maltaromaticum

Strain Designation: MX 5

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 8747

BacDive-ID: 2258

DSM-Number: 20342

keywords: animal pathogen, mesophilic, aerobe, Bacteria, 16S sequence, genome sequence

description: Carnobacterium maltaromaticum MX 5 is an aerobe, mesophilic animal pathogen that was isolated from milk with malty flavour.

strain history: <- M.E. Morgan, MX 5

doi: 10.13145/bacdive2258.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/firmicutes
  • domain: Bacteria
  • phylum: Firmicutes
  • class: Bacilli
  • order: Lactobacillales
  • family: Carnobacteriaceae
  • genus: Carnobacterium
  • species: Carnobacterium maltaromaticum
  • full scientific name: Carnobacterium maltaromaticum corrig. (Miller et al. 1974) Mora et al. 2003
  • synonyms

    @refsynonym
    20215Lactobacillus maltaromicus
    20215Lactobacillus carnis
    20215Carnobacterium piscicola
    20215Lactobacillus piscicola

@ref: 8747

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Carnobacteriaceae

genus: Carnobacterium

species: Carnobacterium maltaromaticum

full scientific name: Carnobacterium maltaromaticum (Miller et al. 1974) Mora et al. 2003

strain designation: MX 5

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
8747COLUMBIA BLOOD MEDIUM (DSMZ Medium 693), microaerobicyeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium693.pdf
8747TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92), microaerobicyeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium92.pdf
39686MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)

culture temp

@refgrowthtypetemperaturerange
8747positivegrowth30mesophilic
39686positivegrowth30mesophilic
49935positivegrowth30mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 49935
  • oxygen tolerance: aerobe

murein

  • @ref: 8747
  • murein short key: A31
  • type: A1gamma m-Dpm-direct

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    49935C14:08.814
    49935C16:019.516
    49935C18:06.718
    49935C14:1 ω7c2.913.85
    49935C16:1 ω9c11.315.774
    49935C18:1 ω9c38.217.769
    49935C18:2 ω6,9c/C18:0 ANTE717.724
    49935C20:1 ω9c1.719.77
    49935C20:2 ω6,9c2.419.735
    49935unknown 13.7661.513.766
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
49935--++-++++---++--+++-+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
8747--+/-+/--+/----+/-++---+++/---

API rID32STR

@refADH Argbeta GLUbeta GARbeta GURalpha GALPALRIBMANSORLACTRERAFSACLARADARLCDEXVPAPPAbeta GALPyrAbeta NAGGTAHIPGLYGPULMALMELMLZMbeta DGTAGbeta MANURE
8747-+---+/-+--++-+--++-+++++/---+--+-+-

Isolation, sampling and environmental information

isolation

@refsample type
8747milk with malty flavour
49935Raw milk with malty flavour

isolation source categories

  • Cat1: #Host Body Product
  • Cat2: #Fluids
  • Cat3: #Milk

Safety information

risk assessment

  • @ref: 8747
  • pathogenicity animal: yes
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Carnobacterium maltaromaticum strain ATCC 27865 16S ribosomal RNA gene, partial sequenceGQ304909784ena2751
20218Carnobacterium maltaromaticum strain ATCC 27865 16S ribosomal RNA gene, partial sequenceJF749288809ena2751
20218Carnobacterium maltaromaticum strain DSM 20342 16S ribosomal RNA gene, partial sequenceM588251501ena2751
20218Lactobacillus maltaromicus gene for 16S ribosomal RNA, partial sequenceD31696195ena2751
20218L.maltaromicus 16S ribosomal RNAX544201499ena2751

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Carnobacterium maltaromaticum DSM 20342 MX5GCA_000744945contigncbi1449341
66792Carnobacterium maltaromaticum DSM 20342GCA_001437315scaffoldncbi1449341
66792Carnobacterium maltaromaticum DSM 203421449341.4wgspatric1449341
66792Carnobacterium maltaromaticum DSM 20342 strain MX51449341.3wgspatric1449341
66792Carnobacterium maltaromaticum MX5, DSM 203422579778520permanentimg1449341

GC content

  • @ref: 8747
  • GC-content: 36.0

External links

@ref: 8747

culture collection no.: DSM 20342, ATCC 27865, CCUG 30142, LMG 6903, JCM 1154

straininfo link

@refpassport
20218http://www.straininfo.net/strains/13854
20218http://www.straininfo.net/strains/13853

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
8747Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20342)https://www.dsmz.de/collection/catalogue/details/culture/DSM-20342
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
39686Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/14899
49935Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 30142)https://www.ccug.se/strain?id=30142
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)