Strain identifier

BacDive ID: 2134

Type strain: Yes

Species: Campylobacter fetus subsp. venerealis

Culture col. no.: DSM 18826, ATCC 19438, CIP 68.29, JCM 2528, NCTC 10354

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General

@ref: 7718

BacDive-ID: 2134

DSM-Number: 18826

keywords: animal pathogen, mesophilic, microaerophile, Bacteria, 16S sequence, genome sequence

description: Campylobacter fetus subsp. venerealis DSM 18826 is a microaerophile, mesophilic animal pathogen that was isolated from heifer vaginal mucus.

strain history: <- CIP <- NCTC <- R. Park

doi: 10.13145/bacdive2134.20211221.6

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/proteobacteria
  • domain: Bacteria
  • phylum: Proteobacteria
  • class: Epsilonproteobacteria
  • order: Campylobacterales
  • family: Campylobacteraceae
  • genus: Campylobacter
  • species: Campylobacter fetus subsp. venerealis
  • full scientific name: Campylobacter fetus subsp. venerealis (Florent 1959) Véron and Chatelain 1973 (Approved Lists 1980)
  • synonyms

    • @ref: 20215
    • synonym: Vibrio fetus subsp. venerealis

@ref: 7718

domain: Bacteria

phylum: Proteobacteria

class: Epsilonproteobacteria

order: Campylobacterales

family: Campylobacteraceae

genus: Campylobacter

species: Campylobacter fetus subsp. venerealis

full scientific name: Campylobacter fetus subsp. venerealis (Florent 1959) Véron and Chatelain 1973

type strain: yes

Morphology

colony morphology

  • @ref: 7718
  • incubation period: 1-2 days

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
7718COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://bacmedia.dsmz.de/medium/693Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
38052MEDIUM 6 - Columbia agar with 10 % horse bloodyesDistilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)

culture temp

@refgrowthtypetemperaturerange
7718positivegrowth37mesophilic
38052positivegrowth37mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 7718
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837316947citrate-assimilation
6837325115malate-assimilation
6837317272propionate-assimilation
6837330089acetate-assimilation
6837330031succinate-assimilation
6837317634D-glucose-assimilation
6837316199urea-hydrolysis

antibiotic resistance

@refChEBImetaboliteis antibioticis sensitivesensitivity conc.
6837348923erythromycinyesyes14 µg
68373474053cefazolinyesyes224 µg
68373100147nalidixic acidyesyes84 µg

metabolite production

  • @ref: 68373
  • Chebi-ID: 16136
  • metabolite: hydrogen sulfide
  • production: no

enzymes

@refvalueactivityec
7718catalase+1.11.1.6
7718cytochrome-c oxidase+1.9.3.1
68373catalase+1.11.1.6
68373L-aspartate arylamidase-3.4.11.21
68373L-arginine arylamidase-
68373pyrrolidonyl arylamidase-3.4.19.3
68373gamma-glutamyltransferase-2.3.2.2
68373urease-3.5.1.5

API CAM

@refURENITESTHIPGGTTTCPYRAArgAAspAPALH2SGLUSUTNALCFZACEPROPMLTCITEROCAT
7718-+-+-----+----------+
7718-+------------------+
7718-++--+--------------+
7718--++----------------+
7718-+-+-+--------------+
7718-+-+-+/---------------+
7718--+/------------------+
7718-+------------------+

Isolation, sampling and environmental information

isolation

  • @ref: 7718
  • sample type: heifer vaginal mucus
  • country: United Kingdom
  • origin.country: GBR
  • continent: Europe
  • latitude: 54
  • longitude: -2

isolation source categories

Cat1Cat2Cat3
#Host Body-Site#Urogenital tract#Vagina
#Host#Mammals#Bovinae (Cow, Cattle)
#Host Body Product#Fluids

Safety information

risk assessment

  • @ref: 7718
  • pathogenicity animal: yes
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Campylobacter fetus subsp. venerealis NCTC 10354 strain ATCC 19438 16S ribosomal RNA gene, partial sequenceJX9125141437ena983328
20218Campylobacter fetus 16S ribosomal RNAL146331448ena196
20218Campylobacter fetus veneralis 16S ribosomal RNAM650111448ena196
7718Campylobacter fetus subsp. venerealis NCTC 10354 16S ribosomal RNA (rrs) gene, partial sequenceDQ1741311343ena983328

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Campylobacter fetus subsp. venerealis NCTC 10354 NCTC 10354GCA_008271385completencbi983328
66792Campylobacter fetus subsp. venerealis 01/165GCA_001686885completencbi32020
66792Campylobacter fetus subsp. venerealis P4531GCA_016406645completencbi32020
66792Campylobacter fetus subsp. venerealis IS16-01257GCA_016612925contigncbi32020
66792Campylobacter fetus subsp. venerealis 66YGCA_002592365contigncbi32020
66792Campylobacter fetus subsp. venerealis TDGCA_002592335contigncbi32020
66792Campylobacter fetus subsp. venerealis SA21-221439GCA_016612985contigncbi32020
66792Campylobacter fetus subsp. venerealis SA21-217832GCA_016612955contigncbi32020
66792Campylobacter fetus subsp. venerealis SA21-217833GCA_016612945contigncbi32020
66792Campylobacter fetus subsp. venerealis zaf3GCA_001699735contigncbi32020
66792Campylobacter fetus subsp. venerealis ADRI513GCA_001699745contigncbi32020
66792Campylobacter fetus subsp. venerealis IS26-07793GCA_016612875contigncbi32020
66792Campylobacter fetus subsp. venerealis 06/341GCA_008526355contigncbi32020
66792Campylobacter fetus subsp. venerealis NWU_ED23GCA_013406955contigncbi32020
66792Campylobacter fetus subsp. venerealis NW_ME2GCA_012274465contigncbi32020
66792Campylobacter fetus subsp. venerealis NCTC 10354 NCTC 10354GCA_000222425chromosomencbi983328
66792Campylobacter fetus subsp. venerealis zaf65GCA_001699725contigncbi32020
66792Campylobacter fetus subsp. venerealis WBT011/09GCA_001699535contigncbi32020
66792Campylobacter fetus subsp. venerealis ADRI1362GCA_001699655contigncbi32020
66792Campylobacter fetus subsp. venerealis NCTC 10354983328.6completepatric983328
66792Campylobacter fetus subsp. venerealis NCTC 10354983328.4wgspatric983328
66792Campylobacter fetus subsp. venerealis strain 01/165 strain cfvi01/16532020.25plasmidpatric32020
66792Campylobacter fetus subsp. venerealis strain 01/165 strain cfvi01/16532020.24plasmidpatric32020
66792Campylobacter fetus subsp. venerealis strain 06/34132020.29wgspatric32020
66792Campylobacter fetus subsp. venerealis strain 1714432020.28completepatric32020
66792Campylobacter fetus subsp. venerealis strain 4111/10832020.26plasmidpatric32020
66792Campylobacter fetus subsp. venerealis strain 66Y32020.22wgspatric32020
66792Campylobacter fetus subsp. venerealis strain ADRI136232020.7wgspatric32020
66792Campylobacter fetus subsp. venerealis strain ADRI51332020.10wgspatric32020
66792Campylobacter fetus subsp. venerealis strain IS16-0125732020.99wgspatric32020
66792Campylobacter fetus subsp. venerealis strain IS26-0779332020.101wgspatric32020
66792Campylobacter fetus subsp. venerealis strain NWU_ED2332020.57wgspatric32020
66792Campylobacter fetus subsp. venerealis strain NW_ME232020.47wgspatric32020
66792Campylobacter fetus subsp. venerealis strain P453132020.98completepatric32020
66792Campylobacter fetus subsp. venerealis strain SA21-21783232020.103wgspatric32020
66792Campylobacter fetus subsp. venerealis strain SA21-21783332020.102wgspatric32020
66792Campylobacter fetus subsp. venerealis strain SA21-22143932020.100wgspatric32020
66792Campylobacter fetus subsp. venerealis strain TD32020.21wgspatric32020
66792Campylobacter fetus subsp. venerealis strain U1032020.27wgspatric32020
66792Campylobacter fetus subsp. venerealis strain WBT011/0932020.6wgspatric32020
66792Campylobacter fetus subsp. venerealis strain cfvi01/16532020.11completepatric32020
66792Campylobacter fetus subsp. venerealis strain zaf332020.9wgspatric32020
66792Campylobacter fetus subsp. venerealis strain zaf6532020.12wgspatric32020
66792Campylobacter fetus venerealis X/161/5, NCTC 103542597489882draftimg983328
66792Campylobacter fetus venerealis TD2851786890completeimg32020

External links

@ref: 7718

culture collection no.: DSM 18826, ATCC 19438, CIP 68.29, JCM 2528, NCTC 10354

straininfo link

@refpassport
20218http://www.straininfo.net/strains/6193
20218http://www.straininfo.net/strains/231245
20218http://www.straininfo.net/strains/6196
20218http://www.straininfo.net/strains/6198

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
7718Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 18826)https://www.dsmz.de/collection/catalogue/details/culture/DSM-18826
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
38052Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/10389
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)