Strain identifier
BacDive ID: 2008
Type strain: 
Species: Cupriavidus necator
Strain Designation: pHG1, H 16, H16, Wilde H16, strain S-10-1, Schlegel H16
Strain history: IAM 12567 <-- NCIB 10442 <-- H. G. Schlegel H16.
NCBI tax ID(s): 381666 (strain), 106590 (species)
version 9.3 (current version)
General
@ref: 197
BacDive-ID: 2008
DSM-Number: 428
keywords: genome sequence, 16S sequence, Bacteria, mesophilic, Gram-negative
description: Cupriavidus necator pHG1 is a mesophilic, Gram-negative bacterium that was isolated from sludge.
NCBI tax id
| NCBI tax id | Matching level |
|---|---|
| 381666 | strain |
| 106590 | species |
strain history
| @ref | history |
|---|---|
| 197 | <- IMG (Alcaligenes eutrophus) <- E. Wilde, H 16 |
| 67770 | IAM 12567 <-- NCIB 10442 <-- H. G. Schlegel H16. |
doi: 10.13145/bacdive2008.20250331.9.3
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Burkholderiaceae
- genus: Cupriavidus
- species: Cupriavidus necator
- full scientific name: Cupriavidus necator Makkar and Casida 1987
@ref: 197
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Burkholderiaceae
genus: Cupriavidus
species: Cupriavidus necator
full scientific name: Cupriavidus necator Makkar and Casida 1987
strain designation: pHG1, H 16, H16, Wilde H16, strain S-10-1, Schlegel H16
type strain: no
Morphology
cell morphology
| @ref | gram stain | confidence |
|---|---|---|
| 125439 | negative | 98.7 |
| 125438 | negative | 97.5 |
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 197 | MINERAL MEDIUM FOR CHEMOLITHOTROPHIC GROWTH (H-3) (DSMZ Medium 81) | yes | https://mediadive.dsmz.de/medium/81 | Name: MINERAL MEDIUM FOR CHEMOLITHOTROPHIC GROWTH (H-3) (DSMZ Medium 81) Composition: Agar 20.1005 g/l Na2HPO4 x 2 H2O 2.91457 g/l KH2PO4 2.31156 g/l NH4Cl 1.00503 g/l MgSO4 x 7 H2O 0.502512 g/l Ferric ammonium citrate 0.0502513 g/l CaCl2 x 2 H2O 0.0100503 g/l NaVO3 x H2O 0.00502512 g/l Calcium pantothenate 0.00251256 g/l Pyridoxine hydrochloride 0.00251256 g/l Nicotinic acid 0.00251256 g/l Thiamine-HCl x 2 H2O 0.00251256 g/l H3BO3 0.00150754 g/l CoCl2 x 6 H2O 0.00100503 g/l Riboflavin 0.000502513 g/l ZnSO4 x 7 H2O 0.000502513 g/l MnCl2 x 4 H2O 0.000150754 g/l Na2MoO4 x 2 H2O 0.000150754 g/l NiCl2 x 6 H2O 0.000100503 g/l CuCl2 x 2 H2O 5.02513e-05 g/l Vitamin B12 5.02513e-05 g/l Folic acid 1.00503e-05 g/l Biotin 5.02513e-06 g/l Distilled water |
| 197 | NUTRIENT AGAR (DSMZ Medium 1) | yes | https://mediadive.dsmz.de/medium/1 | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water |
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 197 | positive | growth | 30 |
| 67770 | positive | growth | 25 |
Physiology and metabolism
oxygen tolerance
- @ref: 125439
- oxygen tolerance: obligate aerobe
- confidence: 99.2
spore formation
- @ref: 125439
- spore formation: no
- confidence: 97.4
compound production
| @ref | compound |
|---|---|
| 197 | PHB |
| 197 | hydrogenase |
| 197 | phenylalanine, hydroxylation of |
| 197 | single cell protein |
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 197 | sludge | Göttingen, Weende-Quelle | Germany | DEU | Europe |
| 67770 | Sludge | Göttingen | Germany | DEU | Europe |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Mud (Sludge)
Safety information
risk assessment
- @ref: 197
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 67770
- description: Ralstonia eutropha DNA for 16S ribosomal RNA
- accession: D88002
- length: 1468
- database: nuccore
- NCBI tax ID: 106590
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Cupriavidus necator H16 | GCA_004798725 | complete | ncbi | 381666 |
| 66792 | Cupriavidus necator H16 | GCA_000009285 | complete | ncbi | 381666 |
| 66792 | Cupriavidus necator H16 strain DSM 428 | 381666.45 | complete | patric | 381666 |
| 66792 | Ralstonia eutropha H16 | 381666.6 | complete | patric | 381666 |
| 66792 | Ralstonia eutropha H16 | 381666.42 | plasmid | patric | 381666 |
| 66792 | Cupriavidus necator H16 | 640427136 | complete | img | 381666 |
| 66792 | Cupriavidus necator H16 DSM 428 | 2858669534 | complete | img | 381666 |
Genome-based predictions
predictions
| @ref | model | trait | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positive | Positive reaction to Gram-staining | no | 97.5 | no |
| 125438 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 94.707 | no |
| 125438 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | yes | 82.225 | no |
| 125438 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 88.788 | no |
| 125438 | thermophile | thermophilic | Ability to grow at temperatures above or equal to 45°C | no | 98.485 | no |
| 125438 | motile2+ | flagellated | Ability to perform flagellated movement | yes | 83.921 | no |
| 125439 | BacteriaNet | spore_formation | Ability to form endo- or exospores | no | 97.4 | |
| 125439 | BacteriaNet | motility | Ability to perform movement | yes | 75.7 | |
| 125439 | BacteriaNet | gram_stain | Reaction to gram-staining | negative | 98.7 | |
| 125439 | BacteriaNet | oxygen_tolerance | Oxygenic conditions needed for growth | obligate aerobe | 99.2 |
External links
@ref: 197
culture collection no.: DSM 428, ATCC 17699, KCTC 22496, NCIB 10442, JCM 20644, ATCC 23440, IAM 12567, NCIMB 10442, CCUG 13797, LMG 1201, CECT 4635, Stanier 337, LMAU A145, CCTM La 2802, CCRC 13036, CCM 3726
straininfo link
- @ref: 71655
- straininfo: 13563
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Enzymology | 4044 | Aromatic amino acid biosynthesis in Alcaligenes eutrophus H 16 III. Properites and regulation of anthranilate synthase. | Friedrich CG, Friedrich B, Schlegel HG | Arch Microbiol | 10.1007/BF00446831 | 1976 | Alcaligenes/*enzymology, Allosteric Regulation, Anthranilate Phosphoribosyltransferase, Anthranilate Synthase/*analysis/antagonists & inhibitors/isolation & purification, Drug Stability, Hydrogen-Ion Concentration, Kinetics, Molecular Weight, Multienzyme Complexes, Temperature, Tryptophan/biosynthesis/pharmacology | Phylogeny |
| Metabolism | 4432 | Regulation of Chorismate mutase-prephenate dehydratase and prephenate dehydrogenase from alcaligenes eutrophus. | Friedrich CG, Friedrich B, Schlegel HG | J Bacteriol | 10.1128/jb.126.2.723-732.1976 | 1976 | Alcaligenes/*enzymology/metabolism, Cell-Free System, Chorismate Mutase/antagonists & inhibitors/*metabolism, Enzyme Activation, Feedback, Hydro-Lyases/*metabolism, Hydrogen-Ion Concentration, Isomerases/*metabolism, NAD/metabolism, Oxidoreductases/*metabolism, Phenylalanine/analogs & derivatives/biosynthesis/pharmacology, Prephenate Dehydratase/antagonists & inhibitors/*metabolism, Prephenate Dehydrogenase/antagonists & inhibitors/*metabolism, Pyruvates/metabolism, Temperature, Tryptophan/pharmacology, Tyrosine/biosynthesis/pharmacology | Enzymology |
| Enzymology | 16576 | Alpha-Isopropylmalate synthase from Alcaligenes eutrophus H 16 I. Purification and general properties. | Wiegel J, Schlegel HG | Arch Microbiol | 10.1007/BF00413087 | 1977 | *2-Isopropylmalate Synthase/isolation & purification, Alcaligenes/*enzymology/growth & development, Cold Temperature, Drug Stability, Electrophoresis, Polyacrylamide Gel, Enzyme Activation, Hydrogen-Ion Concentration, Kinetics, Molecular Weight, *Oxo-Acid-Lyases/isolation & purification | Phylogeny |
| Enzymology | 20865 | Alpha-isopropylmalate synthase from Alcaligenes eutrophus H 16. III. Endproduct inhibition and its relief by valine and isoleucine. | Wiegel J, Schlegel HG | Arch Microbiol | 10.1007/BF00446863 | 1977 | 2-Isopropylmalate Synthase/antagonists & inhibitors/*metabolism, Alcaligenes/*enzymology, Caproates/pharmacology, Histidine/pharmacology, Hydrogen-Ion Concentration, Isoleucine/*pharmacology, Keto Acids/pharmacology, Kinetics, Leucine/pharmacology, Oxo-Acid-Lyases/*metabolism, Temperature, Valine/*pharmacology | Metabolism |
| Enzymology | 186126 | Purification and properties of soluble hydrogenase from Alcaligenes eutrophus H 16. | Schneider K, Schlegel HG | Biochim Biophys Acta | 10.1016/0005-2744(76)90058-9 | 1976 | Alcaligenes/*enzymology, Hydrogen, Kinetics, Molecular Weight, NAD, Oxidation-Reduction, Oxidoreductases/isolation & purification/*metabolism, Spectrometry, Fluorescence, Spectrophotometry, Spectrophotometry, Ultraviolet | Phylogeny |
| Enzymology | 240336 | Kinetics and properties of beta-ketothiolase from Clostridium pasteurianum. | Berndt H, Schlegel HG | Arch Microbiol | 10.1007/BF00436325 | 1975 | Acetoacetates, Acetyl-CoA C-Acyltransferase/antagonists & inhibitors/isolation & purification/*metabolism, Acyltransferases/*metabolism, Alcaligenes/enzymology, Clostridium/*enzymology, Coenzyme A/pharmacology, Electrophoresis, Polyacrylamide Gel, Hydrogen-Ion Concentration, Hydroxybutyrates/metabolism, Isoelectric Point, Isoenzymes/isolation & purification, Kinetics, Molecular Weight | Metabolism |
| Metabolism | 678018 | Mutants of Alcaligenes eutrophus defective in autotrophic metabolism. | Schink B, Schlegel HG | Arch Microbiol | 10.1007/BF00402299 | 1978 | Alcaligenes/genetics/*metabolism, Carbon Dioxide/metabolism, Cell Membrane/enzymology, Cytoplasm/enzymology, Fructose/metabolism, Hydrogen/metabolism, *Mutation, Oxidoreductases/genetics/metabolism, Pyruvates/metabolism | Enzymology |
| Phylogeny | 722280 | Isolation and characterization of polysheaths, phage tail-like defective bacteriophages of Alcaligenes eutrophus H 16. | Walther-Mauruschat A, Mayer F | J Gen Virol | 10.1099/0022-1317-41-2-239 | 1978 | Alcaligenes, Amino Acids/analysis, Bacteriophages/growth & development/*ultrastructure, Defective Viruses/growth & development/*ultrastructure, Models, Structural, Morphogenesis, Peptides/analysis, *Viral Proteins/analysis/isolation & purification | Enzymology |
| Metabolism | 828363 | [Adenosine-dependent death of Hydrogenomonas eutropha (Alcaligenes eutrophus) H 16 (author's transl)]. | Kaltwasser H, Glaeser H | Zentralbl Bakteriol Parasitenkd Infektionskr Hyg | 10.1016/s0044-4057(76)80055-x | 1976 | Adenosine/*pharmacology, Bacterial Proteins/biosynthesis, Deoxyadenosines/pharmacology, Fructose/metabolism, Glutamates/metabolism, Nucleic Acids/biosynthesis, Nucleosides/metabolism, Peptones/metabolism, Pseudomonas/*drug effects/growth & development/metabolism, Succinates/metabolism | Pathogenicity |
| Enzymology | 871226 | Localization and stability of hydrogenases from aerobic hydrogen bacteria. | Schneider K, Schlegel HG | Arch Microbiol | 10.1007/BF00413086 | 1977 | Aerobiosis, Alcaligenes/enzymology, Bacteria/*enzymology, Corynebacterium/enzymology, Cytosol/enzymology, Drug Stability, Hydrogen, Oxidoreductases/*analysis, Paracoccus denitrificans/enzymology, Pseudomonas/enzymology, Spirillum/enzymology, Subcellular Fractions/enzymology | |
| Enzymology | 871227 | alpha-Isopropylmalate synthase from Alcaligenes eutrophus H 16. II. Substrate specificity and kinetics. | Wiegel J, Schlegel HG | Arch Microbiol | 10.1007/BF00413088 | 1977 | *2-Isopropylmalate Synthase/metabolism, Alcaligenes/*enzymology, Allosteric Regulation, Binding Sites, Coenzyme A/analogs & derivatives, Keto Acids, Kinetics, *Oxo-Acid-Lyases/metabolism | Metabolism |
| Metabolism | 1156090 | Aromatic amino acid biosynthesis in Alcaligenes eutrophus H16. II. The isolation and characterization of mutants auxotrophic for phenylalanine and tyrosine. | Friedrich B, Schlegel HG | Arch Microbiol | 10.1007/BF00436341 | 1975 | Alcaligenes/enzymology/isolation & purification/*metabolism, Amino Acids/*biosynthesis, Chorismic Acid/metabolism, Chromatography, DEAE-Cellulose, Culture Media, Cyclohexanecarboxylic Acids/metabolism, Mutagens, *Mutation, Phenylalanine/biosynthesis/deficiency, Prephenate Dehydratase/metabolism, Prephenate Dehydrogenase/metabolism, Pyruvates/metabolism, Tyrosine/biosynthesis/deficiency | Enzymology |
| Enzymology | 1200735 | Regulation of the pyruvate kinase from Alcaligenes eutrophus H 16 in vitro and in vivo. | Wilke D, Schlegel HG | Arch Microbiol | 10.1007/BF00447123 | 1975 | Acetates/metabolism, Adenosine Monophosphate/pharmacology, Adenosine Triphosphate/pharmacology, Alcaligenes/*enzymology/growth & development, Allosteric Regulation, Enzyme Activation, Gluconates/metabolism, Glucosephosphates/pharmacology, Kinetics, Magnesium/pharmacology, Phosphates/pharmacology, Phosphoenolpyruvate, Pyruvate Kinase/antagonists & inhibitors/isolation & purification/*metabolism, Ribosemonophosphates/pharmacology | Metabolism |
| Enzymology | 7049889 | Rhein as an electron acceptor for various flavoproteins and for electron transport particles. | Egerer P, Buhler M, Simon H | Hoppe Seylers Z Physiol Chem | 10.1515/bchm2.1982.363.1.627 | 1982 | Alcaligenes/enzymology, Animals, *Anthraquinones/pharmacology, Cattle, Electron Transport, Flavoproteins/*metabolism, Hydrogenase, Kinetics, Myocardium/metabolism, Oxidoreductases/metabolism, Saccharomyces cerevisiae/metabolism, Spectrophotometry | Metabolism |
| Enzymology | 8020749 | Stability and activity of hydrogenases of Methanobacterium thermoautotrophicum and Alcaligenes eutrophus in reversed micellar systems. | Hoppert M, Braks I, Mayer F | FEMS Microbiol Lett | 10.1111/j.1574-6968.1994.tb06836.x | 1994 | Alcaligenes/*enzymology, Alkanes, Emulsions, Enzyme Reactivators, Enzyme Stability, Hexoses, Methanobacterium/*enzymology, Micelles, Models, Chemical, Oxidoreductases/*metabolism, Polysorbates | Metabolism |
| Metabolism | 16821716 | Identification of oxalotrophic bacteria by neural network analysis of numerical phenetic data. | Sahin N, Aydin S | Folia Microbiol (Praha) | 10.1007/BF02932161 | 2006 | Gram-Negative Aerobic Bacteria/*classification/metabolism, *Neural Networks, Computer, Oxalates/metabolism | Phylogeny |
| Metabolism | 17318537 | Biosynthesis of polyhydroxybutyrate (PHB) and extracellular polymeric substances (EPS) by Ralstonia eutropha ATCC 17699 in batch cultures. | Wang J, Yu HQ | Appl Microbiol Biotechnol | 10.1007/s00253-007-0870-7 | 2007 | Ammonium Sulfate/metabolism, Biomass, Biopolymers/*metabolism, Bioreactors/*microbiology, Culture Media/chemistry, Cupriavidus/growth & development/*metabolism, Extracellular Space/*metabolism, Glucose/metabolism, Hydroxybutyrates/*metabolism | Cultivation |
| Biotechnology | 18266340 | Monitoring poly(3-hydroxybutyrate) production in cupriavidus necator DSM 428 (H16) with raman spectroscopy. | Gelder JD, Willemse-Erix D, Scholtes MJ, Sanchez JI, Maquelin K, Vandenabeele P, Boever PD, Puppels GJ, Moens L, Vos PD | Anal Chem | 10.1021/ac702185d | 2008 | ||
| Metabolism | 20625719 | Reaction engineering studies for the production of 2-hydroxyisobutyric acid with recombinant Cupriavidus necator H 16. | Hoefel T, Wittmann E, Reinecke L, Weuster-Botz D | Appl Microbiol Biotechnol | 10.1007/s00253-010-2739-4 | 2010 | Acyltransferases/genetics, *Bioreactors, Culture Media, Cupriavidus necator/genetics/growth & development/*metabolism, Fermentation, Gene Deletion, Genetic Engineering, Hydroxybutyrates/*metabolism, Industrial Microbiology/*methods, Intramolecular Transferases/genetics/metabolism, Vitamin B 12/metabolism | Biotechnology |
| Metabolism | 21757489 | Molecular genetics and biochemistry of N-acetyltaurine degradation by Cupriavidus necator H16. | Denger K, Lehmann S, Cook AM | Microbiology (Reading) | 10.1099/mic.0.048462-0 | 2011 | Amidohydrolases/chemistry/genetics/metabolism, Bacterial Proteins/chemistry/*genetics/metabolism, Cupriavidus necator/enzymology/*genetics/*metabolism, Gene Expression Regulation, Bacterial, Kinetics, Membrane Transport Proteins/chemistry/genetics/metabolism, Metallochaperones/genetics/metabolism, Multigene Family, Taurine/*analogs & derivatives/metabolism | Enzymology |
| Biotechnology | 24594316 | Production of polyhydroxyalkanoates from spent coffee grounds oil obtained by supercritical fluid extraction technology. | Cruz MV, Paiva A, Lisboa P, Freitas F, Alves VD, Simoes P, Barreiros S, Reis MA | Bioresour Technol | 10.1016/j.biortech.2014.02.013 | 2014 | Biomass, Chromatography, Supercritical Fluid/*methods, Coffee/*chemistry, Cupriavidus necator/growth & development/*metabolism, Oils/*chemistry, Polyhydroxyalkanoates/*biosynthesis, *Waste Products | Metabolism |
| Metabolism | 24751509 | Recovery of amorphous polyhydroxybutyrate granules from Cupriavidus necator cells grown on used cooking oil. | Martino L, Cruz MV, Scoma A, Freitas F, Bertin L, Scandola M, Reis MA | Int J Biol Macromol | 10.1016/j.ijbiomac.2014.04.016 | 2014 | Biomass, Biopolymers/chemistry/metabolism, Bioreactors, Cooking, Cupriavidus necator/*metabolism, Fermentation, Hydroxybutyrates/*chemistry/isolation & purification/metabolism, Liquid-Liquid Extraction, Plant Oils/*chemistry, Thermogravimetry | Enzymology |
| Pathogenicity | 25738966 | Sophorolipid biosurfactants: Possible uses as antibacterial and antibiofilm agent. | Diaz De Rienzo MA, Banat IM, Dolman B, Winterburn J, Martin PJ | N Biotechnol | 10.1016/j.nbt.2015.02.009 | 2015 | Anti-Bacterial Agents/chemistry/*pharmacology, Bacterial Physiological Phenomena/*drug effects, Biofilms/*drug effects/*growth & development, Cell Adhesion/drug effects/physiology, Cell Survival/drug effects, Glycolipids/chemistry/*pharmacology, Surface-Active Agents/chemistry/*pharmacology | |
| Metabolism | 26206741 | Characterization of poly-3-hydroxybutyrate (PHB) produced from Ralstonia eutropha using an alkali-pretreated biomass feedstock. | Saratale GD, Oh MK | Int J Biol Macromol | 10.1016/j.ijbiomac.2015.07.034 | 2015 | Alkalies/*pharmacology, *Biomass, Carbohydrate Metabolism/drug effects, Cupriavidus necator/*drug effects/growth & development/*metabolism, Hydrolysis, Hydroxybutyrates/chemistry/*metabolism, Polyesters/chemistry/*metabolism, Spectrum Analysis, Raman, Thermogravimetry | Pathogenicity |
| Genetics | 31515345 | Complete Genome Sequence of Cupriavidus necator H16 (DSM 428). | Little GT, Ehsaan M, Arenas-Lopez C, Jawed K, Winzer K, Kovacs K, Minton NP | Microbiol Resour Announc | 10.1128/MRA.00814-19 | 2019 | ||
| Metabolism | 31917558 | Characterization of an l-Ascorbate Catabolic Pathway with Unprecedented Enzymatic Transformations. | Stack TMM, Morrison KN, Dettmer TM, Wille B, Kim C, Joyce R, Jermain M, Naing YT, Bhatti K, Francisco BS, Carter MS, Gerlt JA | J Am Chem Soc | 10.1021/jacs.9b09863 | 2020 | Ascorbic Acid/*metabolism, Bacterial Proteins/metabolism, Cupriavidus necator/enzymology/genetics/metabolism, Enzymes/*metabolism, Genes, Bacterial, Oxidation-Reduction | Enzymology |
| 32260526 | Preparation and Characterization of Films Based on a Natural P(3HB)/mcl-PHA Blend Obtained through the Co-culture of Cupriavidus Necator and Pseudomonas Citronellolis in Apple Pulp Waste. | Rebocho AT, Pereira JR, Neves LA, Alves VD, Sevrin C, Grandfils C, Freitas F, Reis MAM | Bioengineering (Basel) | 10.3390/bioengineering7020034 | 2020 | |||
| Biotechnology | 32751380 | Utilization of Noxious Weed Water Hyacinth Biomass as a Potential Feedstock for Biopolymers Production: A Novel Approach. | Saratale RG, Cho SK, Ghodake GS, Shin HS, Saratale GD, Park Y, Lee HS, Bharagava RN, Kim DS | Polymers (Basel) | 10.3390/polym12081704 | 2020 | ||
| 34771249 | Upcycling Biodegradable PVA/Starch Film to a Bacterial Biopigment and Biopolymer. | Pantelic B, Ponjavic M, Jankovic V, Aleksic I, Stevanovic S, Murray J, Fournet MB, Nikodinovic-Runic J | Polymers (Basel) | 10.3390/polym13213692 | 2021 | |||
| Biotechnology | 35215639 | Developing Microbial Co-Culture System for Enhanced Polyhydroxyalkanoates (PHA) Production Using Acid Pretreated Lignocellulosic Biomass. | Saratale RG, Cho SK, Kadam AA, Ghodake GS, Kumar M, Bharagava RN, Varjani S, Nair S, Kim DS, Shin HS, Saratale GD | Polymers (Basel) | 10.3390/polym14040726 | 2022 |
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 197 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 428) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-428 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | 10.1093/nar/gkaa1025 | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 71655 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID13563.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
| 125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann | 10.1101/2024.08.12.607695 | Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets | |||
| 125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy | https://github.com/GenomeNet/deepG | deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 |