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Strain identifier

BacDive ID: 1927

Type strain: No

Species: Burkholderia sp.

Strain history: <- A. Steinbüchel <- M.F. Rodriguez (unclassified strain IPT 64)

NCBI tax ID(s): 111590 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 3521

BacDive-ID: 1927

DSM-Number: 9242

keywords: genome sequence, Bacteria, mesophilic

description: Burkholderia sp. DSM 9242 is a mesophilic bacterium that was isolated from soil.

NCBI tax id

  • NCBI tax id: 111590
  • Matching level: species

strain history: <- A. Steinbüchel <- M.F. Rodriguez (unclassified strain IPT 64)

doi: 10.13145/bacdive1927.20220920.7

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Burkholderiaceae
  • genus: Burkholderia
  • species: Burkholderia sp.
  • full scientific name: Burkholderia Yabuuchi et al. 1993

@ref: 3521

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Burkholderiaceae

genus: Burkholderia

species: Burkholderia sp.

full scientific name: Burkholderia sp.

type strain: no

Morphology

colony morphology

  • @ref: 3521
  • incubation period: 1-2 days

Culture and growth conditions

culture medium

  • @ref: 3521
  • name: CASO AGAR (MERCK 105458) (DSMZ Medium 220)
  • growth: yes
  • link: https://bacmedia.dsmz.de/medium/220
  • composition: Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water

culture temp

  • @ref: 3521
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

compound production

  • @ref: 3521
  • compound: polyhydroxyalkanoic acids

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose+assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose+assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin+hydrolysis
683694853esculin+hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
3521catalase+1.11.1.6
3521cytochrome-c oxidase+1.9.3.1
68369cytochrome oxidase+1.9.3.1
68369gelatinase+
68369beta-glucosidase+3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
3521-----++-+++-++++++++
3521-----++-+++-+++++++++
3521+----++-+++-++++-++++

Isolation, sampling and environmental information

isolation

  • @ref: 3521
  • sample type: soil
  • country: Brazil
  • origin.country: BRA
  • continent: Middle and South America

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Sequence information

Genome sequences

  • @ref: 66792
  • description: Burkholderia sp. DSM 9242
  • accession: 651716620
  • assembly level: draft
  • database: img
  • NCBI tax ID: 111590

External links

@ref: 3521

culture collection no.: DSM 9242, IPT 64

straininfo link

  • @ref: 20218
  • passport: http://www.straininfo.net/strains/161369

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
3521Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 9242)https://www.dsmz.de/collection/catalogue/details/culture/DSM-9242
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
68369Automatically annotated from API 20NE