Strain identifier

BacDive ID: 18048

Type strain: No

Species: Thermoanaerobacterium thermosaccharolyticum

Strain Designation: Haren

Strain history: <- T. A. Hansen; Haren <- M. van Rijssel {1987}

NCBI tax ID(s): 1517 (species)

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General

@ref: 3139

BacDive-ID: 18048

DSM-Number: 7416

keywords: Bacteria, anaerobe

description: Thermoanaerobacterium thermosaccharolyticum Haren is an anaerobe bacterium that was isolated from pond sediment.

NCBI tax id

  • NCBI tax id: 1517
  • Matching level: species

strain history

  • @ref: 3139
  • history: <- T. A. Hansen; Haren <- M. van Rijssel {1987}

doi: 10.13145/bacdive18048.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Thermoanaerobacterales
  • family: Thermoanaerobacteraceae
  • genus: Thermoanaerobacterium
  • species: Thermoanaerobacterium thermosaccharolyticum
  • full scientific name: Thermoanaerobacterium thermosaccharolyticum (McClung 1935) Collins et al. 1994

  • synonyms

    • @ref: 20215
    • synonym: Clostridium thermosaccharolyticum

@ref: 3139

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Thermoanaerobacterales

family: Thermoanaerobacteraceae

genus: Thermoanaerobacterium

species: Thermoanaerobacterium thermosaccharolyticum

full scientific name: Thermoanaerobacterium thermosaccharolyticum (McClung 1935) Collins et al. 1994

strain designation: Haren

type strain: no

Culture and growth conditions

culture medium

  • @ref: 3139
  • name: THERMOANAEROBACTERIUM MEDIUM (DSMZ Medium 211)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/211
  • composition: Name: THERMOANAEROBACTERIUM MEDIUM (DSMZ Medium 211) Composition: Na2HPO4 x 12 H2O 5.21141 g/l D-Glucose 4.91642 g/l NH4Cl 0.983284 g/l Yeast extract 0.983284 g/l Na2S x 9 H2O 0.491642 g/l KH2PO4 0.294985 g/l MgCl2 x 6 H2O 0.196657 g/l Nitrilotriacetic acid 0.12586 g/l NaCl 0.00983284 g/l FeCl2 x 4 H2O 0.00196657 g/l CoCl2 x 6 H2O 0.00167158 g/l FeSO4 x 7 H2O 0.00147493 g/l MnCl2 x 4 H2O 0.000983284 g/l ZnCl2 0.000983284 g/l CaCl2 x 2 H2O 0.000983284 g/l Sodium resazurin 0.000491642 g/l Na2SeO3 x 5 H2O 0.000294985 g/l NiCl2 x 6 H2O 0.000294985 g/l CuCl2 0.000196657 g/l Na2MoO4 x 2 H2O 9.83284e-05 g/l H3BO3 9.83284e-05 g/l Pyridoxine hydrochloride 4.91642e-05 g/l Calcium D-(+)-pantothenate 2.45821e-05 g/l p-Aminobenzoic acid 2.45821e-05 g/l (DL)-alpha-Lipoic acid 2.45821e-05 g/l Nicotinic acid 2.45821e-05 g/l Riboflavin 2.45821e-05 g/l Thiamine HCl 2.45821e-05 g/l Folic acid 9.83284e-06 g/l Biotin 9.83284e-06 g/l Vitamin B12 4.91642e-07 g/l Distilled water

culture temp

  • @ref: 3139
  • growth: positive
  • type: growth
  • temperature: 60

Physiology and metabolism

oxygen tolerance

  • @ref: 3139
  • oxygen tolerance: anaerobe

compound production

  • @ref: 3139
  • compound: pectin-degrading enzymes

Isolation, sampling and environmental information

isolation

  • @ref: 3139
  • sample type: pond sediment
  • geographic location: Haren
  • country: Netherlands
  • origin.country: NLD
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Pond (small)
#Environmental#Aquatic#Sediment

Safety information

risk assessment

  • @ref: 3139
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

GC content

  • @ref: 3139
  • GC-content: 32.0

External links

@ref: 3139

culture collection no.: DSM 7416

straininfo link

  • @ref: 87037
  • straininfo: 48429

literature

  • topic: Enzymology
  • Pubmed-ID: 8481009
  • title: Isolation and characterization of an extracellular glycosylated protein complex from Clostridium thermosaccharolyticum with pectin methylesterase and polygalacturonate hydrolase activity.
  • authors: Van Rijssel M, Gerwig GJ, Hansen TA
  • journal: Appl Environ Microbiol
  • DOI: 10.1128/aem.59.3.828-836.1993
  • year: 1993
  • mesh: Amino Acid Sequence, Bacterial Proteins/chemistry/*isolation & purification/metabolism, Carboxylic Ester Hydrolases/chemistry/*isolation & purification/metabolism, Chromatography, Gel, Clostridium/*chemistry/enzymology, Electrophoresis, Polyacrylamide Gel, Enzyme Stability, Glycoside Hydrolases/chemistry/*isolation & purification/metabolism, Glycosylation, Hexuronic Acids/metabolism, Hydrogen-Ion Concentration, Isoelectric Focusing, Kinetics, Molecular Sequence Data, Molecular Weight, Pectins/metabolism, Sequence Homology, Amino Acid, Ultrafiltration
  • topic2: Metabolism

Reference

@idauthorscataloguedoi/urltitle
3139Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 7416)https://www.dsmz.de/collection/catalogue/details/culture/DSM-7416
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
87037Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID48429.1StrainInfo: A central database for resolving microbial strain identifiers