Strain identifier

BacDive ID: 18036

Type strain: Yes

Species: Sulfobacillus acidophilus

Strain Designation: NAL

Strain history: <- P. R. Norris, strain NAL

NCBI tax ID(s): 679936 (strain), 53633 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 3909

BacDive-ID: 18036

DSM-Number: 10332

keywords: genome sequence, 16S sequence, Bacteria, thermophilic, Gram-positive

description: Sulfobacillus acidophilus NAL is a thermophilic, Gram-positive bacterium that was isolated from coal spoil.

NCBI tax id

NCBI tax idMatching level
53633species
679936strain

strain history

  • @ref: 3909
  • history: <- P. R. Norris, strain NAL

doi: 10.13145/bacdive18036.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Sulfobacillaceae
  • genus: Sulfobacillus
  • species: Sulfobacillus acidophilus
  • full scientific name: Sulfobacillus acidophilus Norris et al. 1996

@ref: 3909

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Clostridiales

family: Alicyclobacillaceae

genus: Sulfobacillus

species: Sulfobacillus acidophilus

full scientific name: Sulfobacillus acidophilus Norris et al. 1996

strain designation: NAL

type strain: yes

Morphology

cell morphology

  • @ref: 69480
  • gram stain: positive
  • confidence: 99.5

multimedia

  • @ref: 66793
  • multimedia content: EM_DSM_10332_1.jpg
  • caption: electron microscopic image
  • intellectual property rights: © HZI/Manfred Rohde

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
3909FERROUS SULFATE/YEAST EXTRACT MEDIUM (DSMZ Medium 1190)yeshttps://mediadive.dsmz.de/medium/1190Name: FERROUS SULFATE/YEAST EXTRACT MEDIUM (DSMZ Medium 1190) Composition: FeSO4 x 7 H2O 5.56 g/l MgSO4 x 7 H2O 0.5 g/l (NH4)2SO4 0.45 g/l Yeast extract 0.2 g/l Na2SO4 x 10 H2O 0.15 g/l KH2PO4 0.05 g/l KCl 0.05 g/l Ca(NO3)2 x 4 H2O 0.014 g/l Distilled water
3909ACIDIMICROBIUM MEDIUM (DSMZ Medium 709)yeshttps://mediadive.dsmz.de/medium/709Name: ACIDIMICROBIUM MEDIUM (DSMZ Medium 709) Composition: MgSO4 x 7 H2O 0.5 g/l (NH4)2SO4 0.4 g/l Yeast extract 0.25 g/l K2HPO4 0.2 g/l KCl 0.1 g/l FeSO4 x 7 H2O 0.01 g/l Distilled water

culture temp

@refgrowthtypetemperaturerangeconfidence
3909positivegrowth45thermophilic
69480thermophilic99.999

Physiology and metabolism

spore formation

  • @ref: 69480
  • spore formation: no
  • confidence: 97.208

Isolation, sampling and environmental information

isolation

  • @ref: 3909
  • sample type: coal spoil
  • country: United Kingdom
  • origin.country: GBR
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Engineered#Waste#Solid waste
#Environmental#Terrestrial#Geologic

Safety information

risk assessment

  • @ref: 3909
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Sulfobacillus acidophilus gene for 16S rRNAAB0898421525ena679936
3909Thermococcus alcaliphilus partial 16S rRNA gene, strain DSM 10322AJ2988721306ena139207
3909Sulfobacillus acidophilus DSM 10332 16S ribosomal RNA, partial sequenceNR_0747581531nuccore679936

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Sulfobacillus acidophilus DSM 10332GCA_000237975completencbi679936
66792Sulfobacillus acidophilus DSM 10332679936.5completepatric679936
66792Sulfobacillus acidophilus DSM 10332679936.13plasmidpatric679936
66792Sulfobacillus acidophilus NAL, DSM 103322506520015completeimg679936

GC content

  • @ref: 3909
  • GC-content: 56.2

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno88no
motileyes74.892no
flagellatedno84.374no
gram-positiveyes60.137no
anaerobicno93.427no
aerobicno50no
halophileno94.887no
spore-formingyes70.27no
thermophileyes99.487no
glucose-utilyes85.735no
glucose-fermentno83.745no

External links

@ref: 3909

culture collection no.: DSM 10332

straininfo link

  • @ref: 87025
  • straininfo: 43844

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Enzymology25149523Newly identified thermostable esterase from Sulfobacillus acidophilus: properties and performance in phthalate ester degradation.Zhang XY, Fan X, Qiu YJ, Li CY, Xing S, Zheng YT, Xu JHAppl Environ Microbiol10.1128/AEM.02072-142014Amino Acid Sequence, Bacteria/chemistry/*enzymology/genetics/*metabolism, Bacterial Proteins/*chemistry/genetics/*metabolism, Biodegradation, Environmental, Cloning, Molecular, Enzyme Stability, Esterases/*chemistry/genetics/*metabolism, Esters/*metabolism, Kinetics, Models, Molecular, Molecular Sequence Data, Phthalic Acids, Sequence Alignment, Substrate Specificity, TemperatureMetabolism
Biotechnology26267113Sulfobacillus thermosulfidooxidans strain Cutipay enhances chalcopyrite bioleaching under moderate thermophilic conditions in the presence of chloride ion.Bobadilla-Fazzini RA, Cortes MP, Maass A, Parada PAMB Express10.1186/s13568-014-0084-12014
Phylogeny34236956Sulfobacillus harzensis sp. nov., an acidophilic bacterium inhabiting mine tailings from a polymetallic mine.Zhang R, Hedrich S, Jin D, Breuker A, Schippers AInt J Syst Evol Microbiol10.1099/ijsem.0.0048712021Bacterial Typing Techniques, Base Composition, Clostridiales/*classification/isolation & purification, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Germany, *Mining, Peptidoglycan/chemistry, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNATranscriptome

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
3909Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 10332)https://www.dsmz.de/collection/catalogue/details/culture/DSM-10332
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
66793Mukherjee et al.10.1038/nbt.3886GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life 35: 676-683 201728604660
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg10.1093/nar/gkaa1025BRENDA, the ELIXIR core data resource in 2021: new developments and updatesNucleic Acids Res. 49: D498-D508 202033211880
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
87025Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID43844.1StrainInfo: A central database for resolving microbial strain identifiers