Strain identifier
BacDive ID: 17985
Type strain: 
Species: Finegoldia magna
Strain Designation: 4008/2
Strain history: <- H. Werner, 4008/2 (Peptococcus variabilis)
NCBI tax ID(s): 1260 (species)
version 8.1 (current version)
General
@ref: 8624
BacDive-ID: 17985
DSM-Number: 20369
keywords: genome sequence, Bacteria, anaerobe, mesophilic
description: Finegoldia magna 4008/2 is an anaerobe, mesophilic bacterium that was isolated from pathological material.
NCBI tax id
- NCBI tax id: 1260
- Matching level: species
strain history
- @ref: 8624
- history: <- H. Werner, 4008/2 (Peptococcus variabilis)
doi: 10.13145/bacdive17985.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Peptoniphilaceae
- genus: Finegoldia
- species: Finegoldia magna
- full scientific name: Finegoldia magna (Prévot 1933) Murdoch and Shah 2000
synonyms
@ref synonym 20215 Diplococcus magnus 20215 Peptostreptococcus magnus 20215 Peptococcus magnus
@ref: 8624
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Clostridiales
family: Peptoniphilaceae
genus: Finegoldia
species: Finegoldia magna
full scientific name: Finegoldia magna (Prévot 1933) Murdoch and Shah 2000
strain designation: 4008/2
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 8624 | PYG MEDIUM (MODIFIED) (DSMZ Medium 104) | yes | https://mediadive.dsmz.de/medium/104 | Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water |
| 8624 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://mediadive.dsmz.de/medium/693 | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
culture temp
- @ref: 8624
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 8624
- oxygen tolerance: anaerobe
murein
- @ref: 8624
- murein short key: A12.01
- type: A3alpha' L-Lys-Gly
Isolation, sampling and environmental information
isolation
- @ref: 8624
- sample type: pathological material
isolation source categories
- Cat1: #Host Body-Site
Safety information
risk assessment
- @ref: 8624
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Finegoldia magna strain FDAARGOS_1556 | 1260.197 | complete | patric | 1260 |
| 66792 | Finegoldia magna strain FDAARGOS_1556 | 1260.192 | complete | patric | 1260 |
GC content
- @ref: 8624
- GC-content: 32.3
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | no | 92.644 | no |
| gram-positive | yes | 95.615 | no |
| anaerobic | yes | 99.462 | yes |
| aerobic | no | 98.526 | yes |
| halophile | no | 68.162 | no |
| spore-forming | no | 88.58 | no |
| thermophile | no | 96.445 | no |
| glucose-util | yes | 79.786 | no |
| flagellated | no | 97.619 | no |
| glucose-ferment | yes | 64.513 | no |
External links
@ref: 8624
culture collection no.: DSM 20369
straininfo link
- @ref: 86972
- straininfo: 49614
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 8624 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20369) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-20369 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
| 86972 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID49614.1 | StrainInfo: A central database for resolving microbial strain identifiers |