Strain identifier

BacDive ID: 17892

Type strain: Yes

Species: Alkalimonas delamerensis

Strain Designation: 1E1

Strain history: <- B. E. Jones; 1E1 <- W. D. Grant; E1

NCBI tax ID(s): 265981 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 7498

BacDive-ID: 17892

DSM-Number: 18314

keywords: 16S sequence, Bacteria, mesophilic

description: Alkalimonas delamerensis 1E1 is a mesophilic bacterium that was isolated from dried lake mud.

NCBI tax id

  • NCBI tax id: 265981
  • Matching level: species

strain history

  • @ref: 7498
  • history: <- B. E. Jones; 1E1 <- W. D. Grant; E1

doi: 10.13145/bacdive17892.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Gammaproteobacteria, not assigned to order
  • family: Gammaproteobacteria, not assigned to family
  • genus: Alkalimonas
  • species: Alkalimonas delamerensis
  • full scientific name: Alkalimonas delamerensis Ma et al. 2007

@ref: 7498

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Oceanospirillales

family: Gammaproteobacteria, not assigned to family

genus: Alkalimonas

species: Alkalimonas delamerensis

full scientific name: Alkalimonas delamerensis Ma et al. 2007

strain designation: 1E1

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 7498
  • name: BOGORIELLA MEDIUM (DSMZ Medium 785)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/785
  • composition: Name: BOGORIELLA MEDIUM (DSMZ Medium 785) Composition: NaCl 40.0 g/l Glucose 10.0 g/l Na2CO3 10.0 g/l Yeast extract 5.0 g/l Peptone 5.0 g/l KH2PO4 1.0 g/l MgSO4 x 7 H2O 0.2 g/l Distilled water

culture temp

  • @ref: 7498
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 7498
  • sample type: dried lake mud
  • geographic location: Lake Elmenteita
  • country: Kenya
  • origin.country: KEN
  • continent: Africa

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Lake (large)
#Environmental#Terrestrial#Mud (Sludge)

Safety information

risk assessment

  • @ref: 7498
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 7498
  • description: Alkalimonas delamerensis 16S rRNA gene, type strain 1E1T
  • accession: X92130
  • length: 1497
  • database: ena
  • NCBI tax ID: 265981

GC content

  • @ref: 7498
  • GC-content: 55.4

External links

@ref: 7498

culture collection no.: DSM 18314, CBS 391.94, CGMCC 1.6297

straininfo link

  • @ref: 86881
  • straininfo: 297122

literature

  • topic: Phylogeny
  • Pubmed-ID: 14986177
  • title: Alkalimonas amylolytica gen. nov., sp. nov., and Alkalimonas delamerensis gen. nov., sp. nov., novel alkaliphilic bacteria from soda lakes in China and East Africa.
  • authors: Ma Y, Xue Y, Grant WD, Collins NC, Duckworth AW, Van Steenbergen RP, Jones BE
  • journal: Extremophiles
  • DOI: 10.1007/s00792-004-0377-4
  • year: 2004
  • mesh: Africa, Eastern, Base Composition, China, DNA, Bacterial/chemistry/genetics, Fatty Acids/analysis, Fresh Water/microbiology, Gammaproteobacteria/*classification/genetics/*metabolism/ultrastructure, Genotype, Hydrogen-Ion Concentration, Microscopy, Electron, Phenotype, Phylogeny, Sodium Chloride, Species Specificity
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitle
7498Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 18314)https://www.dsmz.de/collection/catalogue/details/culture/DSM-18314
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
86881Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID297122.1StrainInfo: A central database for resolving microbial strain identifiers