Strain identifier

BacDive ID: 1788

Type strain: Yes

Species: Bosea eneae

Strain Designation: 34614

Strain history: CIP <- 1999, B. La Scola, NRC, Fac. Medicine, Marseille, France: strain 34614

NCBI tax ID(s): 151454 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 15778

BacDive-ID: 1788

DSM-Number: 21596

keywords: 16S sequence, Bacteria, aerobe, mesophilic, Gram-negative, motile, rod-shaped, colony-forming

description: Bosea eneae 34614 is an aerobe, mesophilic, Gram-negative bacterium that forms circular colonies and was isolated from hospital water supplies of La Timone Hospital Centre.

NCBI tax id

  • NCBI tax id: 151454
  • Matching level: species

strain history

@refhistory
15778<- CCUG <- B. La Scola, CNRS, Marseille; 34614
394991999, B. La Scola, NRC, Fac. Medicine, Marseille, France: strain 34614
119032CIP <- 1999, B. La Scola, NRC, Fac. Medicine, Marseille, France: strain 34614

doi: 10.13145/bacdive1788.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Hyphomicrobiales
  • family: Boseaceae
  • genus: Bosea
  • species: Bosea eneae
  • full scientific name: Bosea eneae La Scola et al. 2003

@ref: 15778

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhizobiales

family: Boseaceae

genus: Bosea

species: Bosea eneae

full scientific name: Bosea eneae La Scola et al. 2003

strain designation: 34614

type strain: yes

Morphology

cell morphology

@refgram staincell shapemotilityflagellum arrangement
23324negativerod-shapedyesmonotrichous, polar
119032negativerod-shapedyes

colony morphology

@reftype of hemolysishemolysis abilitycolony colorcolony shapeincubation periodmedium used
23324alpha1creamcircular2-3 daysBCYE agar
556682-3 days

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
15778R2A MEDIUM (DSMZ Medium 830)yeshttps://mediadive.dsmz.de/medium/830Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
23324BCYE agaryes
23324Columbia agaryes5% sheep blood, 0.2% yeast extract
23324MacConkey's agaryes
23324NByes
39499MEDIUM 23 - for Afipia and LegionellayesDistilled water make up to (1000.000 ml);Legionella agar (37.000 g);Legionella - enrichment mixture (10.000 ml)
119032CIP Medium 23yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=23

culture temp

@refgrowthtypetemperaturerange
15778positivegrowth28mesophilic
23324positivegrowth25mesophilic
23324positivegrowth37mesophilic
23324nogrowth42thermophilic
39499positivegrowth30mesophilic
55668positivegrowth30mesophilic
119032positivegrowth22-30
119032nogrowth15psychrophilic
119032nogrowth37mesophilic
119032nogrowth41thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 55668
  • oxygen tolerance: aerobe

halophily

  • @ref: 23324
  • salt: NaCl
  • growth: no
  • tested relation: growth
  • concentration: 6 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
2332422599arabinose-assimilation
2332416947citrate-assimilation
2332417634D-glucose-assimilation
2332425115malate-assimilation
2332417306maltose-assimilation
2332429864mannitol-assimilation
2332437684mannose-assimilation
23324506227N-acetylglucosamine-assimilation
2332418401phenylacetate-assimilation
23324168082-dehydro-D-gluconate-builds acid from
23324174265-dehydro-D-gluconate-builds acid from
2332427613amygdalin-builds acid from
2332418305arbutin-builds acid from
2332415963ribitol-builds acid from
2332417108D-arabinose-builds acid from
2332418333D-arabitol-builds acid from
2332417057cellobiose-builds acid from
2332415824D-fructose-builds acid from
2332428847D-fucose-builds acid from
2332412936D-galactose-builds acid from
2332417634D-glucose-builds acid from
2332417716lactose-builds acid from
2332462318D-lyxose-builds acid from
2332417306maltose-builds acid from
2332416899D-mannitol-builds acid from
2332416024D-mannose-builds acid from
233246731melezitose-builds acid from
2332428053melibiose-builds acid from
2332416634raffinose-builds acid from
2332416988D-ribose-builds acid from
2332417992sucrose-builds acid from
2332417924D-sorbitol-builds acid from
2332416443D-tagatose-builds acid from
2332416551D-trehalose-builds acid from
2332432528turanose-builds acid from
2332465327D-xylose-builds acid from
2332416813galactitol-builds acid from
2332417113erythritol-builds acid from
233244853esculin-builds acid from
2332428066gentiobiose-builds acid from
2332424265gluconate-builds acid from
2332417754glycerol-builds acid from
2332428087glycogen-builds acid from
2332417268myo-inositol-builds acid from
2332415443inulin-builds acid from
2332430849L-arabinose-builds acid from
2332418403L-arabitol-builds acid from
2332418287L-fucose-builds acid from
2332462345L-rhamnose-builds acid from
2332417266L-sorbose-builds acid from
2332465328L-xylose-builds acid from
23324320061methyl alpha-D-glucopyranoside-builds acid from
2332443943methyl alpha-D-mannoside-builds acid from
2332474863methyl beta-D-xylopyranoside-builds acid from
23324506227N-acetylglucosamine-builds acid from
2332417814salicin-builds acid from
2332428017starch-builds acid from
2332417151xylitol-builds acid from
233244853esculin-hydrolysis
233245291gelatin-hydrolysis
2332416094thiosulfate-oxidation
2332417632nitrate-reduction
2332417128adipate+assimilation
2332424265gluconate+assimilation
119032606565hippurate+hydrolysis
11903217632nitrate-reduction
11903216301nitrite-reduction

antibiotic resistance

@refChEBImetaboliteis antibioticis sensitivesensitivity conc.group IDis resistant
2332450845doxycyclineyesyes1 µg/mL (MIC)
233243542cephalothinyesyes128 µg/mL (MIC)
2332417833gentamicinyesyes128 µg/mL (MIC)
23324209807cefoxitinyesyes2 µg/mL (MIC)
233247528netilmycinyesyes2 µg/mL (MIC)
233242676amoxicillinyesyes256 µg/mL (MIC)
23324478164cefepimeyesyes256 µg/mL (MIC)
233243508ceftazidimeyesyes256 µg/mL (MIC)
2332429007ceftriaxoneyesyes256 µg/mL (MIC)
23324100241ciprofloxacinyesyes256 µg/mL (MIC)
233243770co-trimoxazoleyesyes256 µg/mL (MIC)
2332437943colistinyesyes256 µg/mL (MIC)
2332417334penicillinyesyes256 µg/mL (MIC)
233248232piperacillinyesyes256 µg/mL (MIC)
233249587ticarcillinyesyes256 µg/mL (MIC)
2332428001vancomycinyesyes256 µg/mL (MIC)
233242676amoxicillinyesyes32 µg/mL (MIC)12
2332428077rifampicinyesyes4 µg/mL (MIC)
2332448923erythromycinyesyes64 µg/mL (MIC)
23324471744imipenemyesyes64 µg/mL (MIC)
2332428864tobramycinyesyes64 µg/mL (MIC)
233242637amikacinyesyes8 µg/mL (MIC)
2332448947clavulanic acidyesyes32 µg/mL (MIC)12
1190320129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)yesnoyes

metabolite production

  • @ref: 119032
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
23324arginine dihydrolase-3.5.3.6
23324beta-galactosidase-3.2.1.23
23324catalase+1.11.1.6
23324cytochrome oxidase+1.9.3.1
23324urease+3.5.1.5
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase-3.2.1.21
68382alpha-glucosidase+3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase-3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin-3.4.21.4
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382leucine arylamidase-3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
119032oxidase+
119032alcohol dehydrogenase-1.1.1.1
119032gelatinase-
119032catalase+1.11.1.6
119032gamma-glutamyltransferase-2.3.2.2
119032lysine decarboxylase-4.1.1.18
119032ornithine decarboxylase-4.1.1.17
119032urease+3.5.1.5

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
119032-+++-------+---+----

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
15778hospital water supplies of La Timone Hospital CentreMarseillesFranceFRAEurope
55668Water,hospital water supply
119032Environment, Hospital water supplies

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Freshwater
#Infection#Medical environment#Clinic

taxonmaps

  • @ref: 69479
  • File name: preview.99_3093.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_86;96_1319;97_1566;98_1905;99_3093&stattab=map
  • Last taxonomy: Bosea
  • 16S sequence: AF288300
  • Sequence Identity:
  • Total samples: 1248
  • soil counts: 165
  • aquatic counts: 435
  • animal counts: 235
  • plant counts: 413

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
157781Risk group (German classification)
1190321Risk group (French classification)

Sequence information

16S sequences

  • @ref: 15778
  • description: Alpha proteobacterium 34614 16S ribosomal RNA gene, partial sequence
  • accession: AF288300
  • length: 1446
  • database: ena
  • NCBI tax ID: 1211774

GC content

  • @ref: 23324
  • GC-content: 69.0
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 15778

culture collection no.: DSM 21596, CCUG 43111, CIP 106338

straininfo link

  • @ref: 71435
  • straininfo: 100565

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny12656146Bosea eneae sp. nov., Bosea massiliensis sp. nov. and Bosea vestrisii sp. nov., isolated from hospital water supplies, and emendation of the genus Bosea (Das et al. 1996).La Scola B, Mallet MN, Grimont PAD, Raoult DInt J Syst Evol Microbiol10.1099/ijs.0.02127-02003Alphaproteobacteria/*classification/genetics/isolation & purification/metabolism, Base Composition, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/genetics, Hospitals, Molecular Sequence Data, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Species Specificity, *Water MicrobiologyGenetics
Phylogeny30882299Bosea psychrotolerans sp. nov., a psychrotrophic alphaproteobacterium isolated from Lake Michigan water.Albert RA, McGuine M, Pavlons SC, Roecker J, Bruess J, Mossman S, Sun S, King M, Hong S, Farrance CE, Danner J, Joung Y, Shapiro N, Whitman WB, Busse HJInt J Syst Evol Microbiol10.1099/ijsem.0.0033192019Bacterial Typing Techniques, Base Composition, Bradyrhizobiaceae/*classification/isolation & purification, DNA, Bacterial/genetics, Fatty Acids/chemistry, Lakes/*microbiology, Michigan, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Spermidine/analogs & derivatives/chemistry, Ubiquinone/chemistryTranscriptome

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
15778Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 21596)https://www.dsmz.de/collection/catalogue/details/culture/DSM-21596
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
23324Bernard La Scola, Marie-Noelle Mallet, Patrick A. D. Grimont, Didier Raoult10.1099/ijs.0.02127-0Bosea eneae sp. nov., Bosea massiliensis sp. nov. and Bosea vestrisii sp. nov., isolated from hospital water supplies, and emendation of the genus Bosea (Das et al. 1996)IJSEM 53: 15-20 200312656146
39499Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/18458
55668Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 43111)https://www.ccug.se/strain?id=43111
68382Automatically annotated from API zym
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
71435Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID100565.1StrainInfo: A central database for resolving microbial strain identifiers
119032Curators of the CIPCollection of Institut Pasteur (CIP 106338)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20106338