Strain identifier
BacDive ID: 17727
Type strain:
Species: Actinopolyspora algeriensis
Strain Designation: H19
Strain history: <- N. Sabaou, LPBVB, Kouba, Algeria; H19
NCBI tax ID(s): 995059 (species)
General
@ref: 17273
BacDive-ID: 17727
DSM-Number: 45476
keywords: 16S sequence, Bacteria, aerobe, mesophilic
description: Actinopolyspora algeriensis H19 is an aerobe, mesophilic bacterium that was isolated from Saharan soil.
NCBI tax id
- NCBI tax id: 995059
- Matching level: species
strain history
- @ref: 17273
- history: <- N. Sabaou, LPBVB, Kouba, Algeria; H19
doi: 10.13145/bacdive17727.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Pseudonocardiales
- family: Pseudonocardiaceae
- genus: Actinopolyspora
- species: Actinopolyspora algeriensis
- full scientific name: Actinopolyspora algeriensis Meklat et al. 2013
@ref: 17273
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Actinopolysporaceae
genus: Actinopolyspora
species: Actinopolyspora algeriensis
full scientific name: Actinopolyspora algeriensis Meklat et al. 2013
strain designation: H19
type strain: yes
Morphology
colony morphology
- @ref: 62831
- incubation period: 21-28 days
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
17273 | CM + YE MEDIUM (DSMZ Medium 549) | yes | https://mediadive.dsmz.de/medium/549 | Name: CM + YE MEDIUM (DSMZ Medium 549) Composition: NaCl 200.0 g/l MgSO4 x 7 H2O 20.0 g/l Agar 15.0 g/l Yeast extract 10.0 g/l Casamino acids 7.5 g/l Na3-citrate 3.0 g/l KCl 2.0 g/l FeSO4 x 7 H2O 0.01 g/l HCl 3.646e-05 g/l Distilled water |
17273 | CM-MEDIUM (DSMZ Medium 1504) | yes | https://mediadive.dsmz.de/medium/1504 | Name: CM MEDIUM (DSMZ Medium 1504) Composition: NaCl 150.0 g/l Agar 20.0 g/l MgSO4 x 7 H2O 10.0 g/l Yeast extract 10.0 g/l Peptone 7.5 g/l Na3-citrate 3.0 g/l KCl 2.0 g/l FeSO4 x 7 H2O Distilled water |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
17273 | positive | growth | 28 | mesophilic |
62831 | positive | growth | 30 | mesophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 62831
- oxygen tolerance: aerobe
Isolation, sampling and environmental information
isolation
@ref | sample type | geographic location | country | origin.country | continent | sampling date |
---|---|---|---|---|---|---|
17273 | Saharan soil | Ouargla province, Bamendil palm grove | Algeria | DZA | Africa | |
62831 | Desert soil,Sahara desert | Bemendil Region,Ouargla Province | Algeria | DZA | Africa | 2006 |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Terrestrial | #Soil |
#Environmental | #Terrestrial | #Desert |
#Climate | #Hot | #Arid |
taxonmaps
- @ref: 69479
- File name: preview.99_162092.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_495;96_2401;97_2923;98_3701;99_162092&stattab=map
- Last taxonomy: Actinopolyspora algeriensis
- 16S sequence: HQ918195
- Sequence Identity:
- Total samples: 18
- soil counts: 11
- aquatic counts: 1
- animal counts: 5
- plant counts: 1
Safety information
risk assessment
- @ref: 17273
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 17273
- description: Actinopolyspora algeriensis strain H19 16S ribosomal RNA gene, partial sequence
- accession: HQ918195
- length: 1544
- database: ena
- NCBI tax ID: 995059
External links
@ref: 17273
culture collection no.: DSM 45476, CCUG 62415
straininfo link
- @ref: 86718
- straininfo: 402308
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Phylogeny | 22872369 | Actinopolyspora algeriensis sp. nov., a novel halophilic actinomycete isolated from a Saharan soil. | Meklat A, Bouras N, Zitouni A, Mathieu F, Lebrihi A, Schumann P, Sproer C, Klenk HP, Sabaou N | Extremophiles | 10.1007/s00792-012-0473-9 | 2012 | *Actinobacteria/classification/genetics/isolation & purification, Algeria, RNA, Bacterial/*genetics, RNA, Ribosomal, 16S/*genetics, Sequence Analysis, RNA/methods, *Soil Microbiology | Transcriptome |
Phylogeny | 23196893 | Actinopolyspora saharensis sp. nov., a novel halophilic actinomycete isolated from a Saharan soil of Algeria. | Meklat A, Bouras N, Zitouni A, Mathieu F, Lebrihi A, Schumann P, Sproer C, Klenk HP, Sabaou N | Antonie Van Leeuwenhoek | 10.1007/s10482-012-9859-z | 2012 | Actinomycetales/*classification/growth & development/*isolation & purification, Algeria, Bacterial Typing Techniques, Carbohydrates/analysis, Cell Wall/chemistry, Cluster Analysis, Cytosol/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Hydrogen-Ion Concentration, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/analysis, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sodium Chloride/metabolism, *Soil Microbiology, Temperature, Vitamin K 2/analysis | Genetics |
Phylogeny | 25429761 | Actinopolyspora biskrensis sp. nov., a novel halophilic actinomycete isolated from Northern Sahara. | Saker R, Bouras N, Meklat A, Zitouni A, Schumann P, Sproer C, Klenk HP, Sabaou N | Curr Microbiol | 10.1007/s00284-014-0740-3 | 2014 | Actinomycetaceae/*classification/genetics/isolation & purification/metabolism, Africa, Northern, Metabolomics, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA | Phenotype |
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
17273 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45476) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-45476 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
62831 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 62415) | https://www.ccug.se/strain?id=62415 | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
86718 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID402308.1 | StrainInfo: A central database for resolving microbial strain identifiers |