Strain identifier

BacDive ID: 17727

Type strain: Yes

Species: Actinopolyspora algeriensis

Strain Designation: H19

Strain history: <- N. Sabaou, LPBVB, Kouba, Algeria; H19

NCBI tax ID(s): 995059 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 1:
version 8.1 (current version)

General

@ref: 17273

BacDive-ID: 17727

DSM-Number: 45476

keywords: 16S sequence, Bacteria, aerobe, mesophilic

description: Actinopolyspora algeriensis H19 is an aerobe, mesophilic bacterium that was isolated from Saharan soil.

NCBI tax id

  • NCBI tax id: 995059
  • Matching level: species

strain history

  • @ref: 17273
  • history: <- N. Sabaou, LPBVB, Kouba, Algeria; H19

doi: 10.13145/bacdive17727.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Pseudonocardiales
  • family: Pseudonocardiaceae
  • genus: Actinopolyspora
  • species: Actinopolyspora algeriensis
  • full scientific name: Actinopolyspora algeriensis Meklat et al. 2013

@ref: 17273

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Actinopolysporaceae

genus: Actinopolyspora

species: Actinopolyspora algeriensis

full scientific name: Actinopolyspora algeriensis Meklat et al. 2013

strain designation: H19

type strain: yes

Morphology

colony morphology

  • @ref: 62831
  • incubation period: 21-28 days

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
17273CM + YE MEDIUM (DSMZ Medium 549)yeshttps://mediadive.dsmz.de/medium/549Name: CM + YE MEDIUM (DSMZ Medium 549) Composition: NaCl 200.0 g/l MgSO4 x 7 H2O 20.0 g/l Agar 15.0 g/l Yeast extract 10.0 g/l Casamino acids 7.5 g/l Na3-citrate 3.0 g/l KCl 2.0 g/l FeSO4 x 7 H2O 0.01 g/l HCl 3.646e-05 g/l Distilled water
17273CM-MEDIUM (DSMZ Medium 1504)yeshttps://mediadive.dsmz.de/medium/1504Name: CM MEDIUM (DSMZ Medium 1504) Composition: NaCl 150.0 g/l Agar 20.0 g/l MgSO4 x 7 H2O 10.0 g/l Yeast extract 10.0 g/l Peptone 7.5 g/l Na3-citrate 3.0 g/l KCl 2.0 g/l FeSO4 x 7 H2O Distilled water

culture temp

@refgrowthtypetemperaturerange
17273positivegrowth28mesophilic
62831positivegrowth30mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 62831
  • oxygen tolerance: aerobe

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentsampling date
17273Saharan soilOuargla province, Bamendil palm groveAlgeriaDZAAfrica
62831Desert soil,Sahara desertBemendil Region,Ouargla ProvinceAlgeriaDZAAfrica2006

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Soil
#Environmental#Terrestrial#Desert
#Climate#Hot#Arid

taxonmaps

  • @ref: 69479
  • File name: preview.99_162092.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_495;96_2401;97_2923;98_3701;99_162092&stattab=map
  • Last taxonomy: Actinopolyspora algeriensis
  • 16S sequence: HQ918195
  • Sequence Identity:
  • Total samples: 18
  • soil counts: 11
  • aquatic counts: 1
  • animal counts: 5
  • plant counts: 1

Safety information

risk assessment

  • @ref: 17273
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 17273
  • description: Actinopolyspora algeriensis strain H19 16S ribosomal RNA gene, partial sequence
  • accession: HQ918195
  • length: 1544
  • database: ena
  • NCBI tax ID: 995059

External links

@ref: 17273

culture collection no.: DSM 45476, CCUG 62415

straininfo link

  • @ref: 86718
  • straininfo: 402308

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny22872369Actinopolyspora algeriensis sp. nov., a novel halophilic actinomycete isolated from a Saharan soil.Meklat A, Bouras N, Zitouni A, Mathieu F, Lebrihi A, Schumann P, Sproer C, Klenk HP, Sabaou NExtremophiles10.1007/s00792-012-0473-92012*Actinobacteria/classification/genetics/isolation & purification, Algeria, RNA, Bacterial/*genetics, RNA, Ribosomal, 16S/*genetics, Sequence Analysis, RNA/methods, *Soil MicrobiologyTranscriptome
Phylogeny23196893Actinopolyspora saharensis sp. nov., a novel halophilic actinomycete isolated from a Saharan soil of Algeria.Meklat A, Bouras N, Zitouni A, Mathieu F, Lebrihi A, Schumann P, Sproer C, Klenk HP, Sabaou NAntonie Van Leeuwenhoek10.1007/s10482-012-9859-z2012Actinomycetales/*classification/growth & development/*isolation & purification, Algeria, Bacterial Typing Techniques, Carbohydrates/analysis, Cell Wall/chemistry, Cluster Analysis, Cytosol/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Hydrogen-Ion Concentration, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/analysis, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sodium Chloride/metabolism, *Soil Microbiology, Temperature, Vitamin K 2/analysisGenetics
Phylogeny25429761Actinopolyspora biskrensis sp. nov., a novel halophilic actinomycete isolated from Northern Sahara.Saker R, Bouras N, Meklat A, Zitouni A, Schumann P, Sproer C, Klenk HP, Sabaou NCurr Microbiol10.1007/s00284-014-0740-32014Actinomycetaceae/*classification/genetics/isolation & purification/metabolism, Africa, Northern, Metabolomics, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNAPhenotype

Reference

@idauthorscataloguedoi/urltitle
17273Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45476)https://www.dsmz.de/collection/catalogue/details/culture/DSM-45476
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
62831Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 62415)https://www.ccug.se/strain?id=62415
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
86718Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID402308.1StrainInfo: A central database for resolving microbial strain identifiers