Strain identifier
BacDive ID: 17660
Type strain: 
Species: Nevskia ramosa
Strain Designation: OL1
Strain history: <- H. Cypionka <- H. Stürmeyer, OL1
NCBI tax ID(s): 64002 (species)
version 8.1 (current version)
General
@ref: 4391
BacDive-ID: 17660
DSM-Number: 11500
keywords: 16S sequence, Bacteria, mesophilic
description: Nevskia ramosa OL1 is a mesophilic bacterium that was isolated from ditch water.
NCBI tax id
- NCBI tax id: 64002
- Matching level: species
strain history
- @ref: 4391
- history: <- H. Cypionka <- H. Stürmeyer, OL1
doi: 10.13145/bacdive17660.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Nevskiales
- family: Nevskiaceae
- genus: Nevskia
- species: Nevskia ramosa
- full scientific name: Nevskia ramosa Famintzin 1892 (Approved Lists 1980)
@ref: 4391
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Xanthomonadales
family: Nevskiaceae
genus: Nevskia
species: Nevskia ramosa
full scientific name: Nevskia ramosa Famintzin 1892
strain designation: OL1
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 4391 | R2A MEDIUM (DSMZ Medium 830) | yes | https://mediadive.dsmz.de/medium/830 | Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water |
| 4391 | NEVSKIA MEDIUM (DSMZ Medium 828) | yes | https://mediadive.dsmz.de/medium/828 | Name: NEVSKIA MEDIUM (DSMZ Medium 828) Composition: Potassium phosphate buffer 64.35 g/l Agar 15.0 g/l Na-lactate 0.56 g/l MgSO4 x 7 H2O 0.05 g/l CaCl2 x 2 H2O 0.014 g/l Nitrilotriacetic acid 0.0064 g/l HCl 0.00125 g/l FeCl2 x 4 H2O 0.001 g/l Pyridoxine hydrochloride 0.00015 g/l Thiamine-HCl x 2 H2O 0.0001 g/l Nicotinic acid 0.0001 g/l CoCl2 x 6 H2O 9.5e-05 g/l Calcium pantothenate 5e-05 g/l MnCl2 x 4 H2O 5e-05 g/l Vitamin B12 5e-05 g/l p-Aminobenzoic acid 4e-05 g/l ZnCl2 3.5e-05 g/l Na2MoO4 x 2 H2O 1.8e-05 g/l NiCl2 x 6 H2O 1.2e-05 g/l D-(+)-biotin 1e-05 g/l H3BO3 3e-06 g/l CuCl2 x 2 H2O 1e-06 g/l Distilled water |
culture temp
- @ref: 4391
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 4391
- sample type: ditch water
- geographic location: Oldenburg
- country: Germany
- origin.country: DEU
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Freshwater |
| #Engineered | #Built environment |
taxonmaps
- @ref: 69479
- File name: preview.99_10853.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_146;96_3049;97_3746;98_4754;99_10853&stattab=map
- Last taxonomy: Nevskia
- 16S sequence: AJ001011
- Sequence Identity:
- Total samples: 2257
- soil counts: 130
- aquatic counts: 1366
- animal counts: 649
- plant counts: 112
Safety information
risk assessment
- @ref: 4391
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 4391
- description: Nevskia ramosa 16S ribosomal RNA (strain OL1)
- accession: AJ001011
- length: 1374
- database: ena
- NCBI tax ID: 64002
GC content
- @ref: 4391
- GC-content: 69.0
- method: high performance liquid chromatography (HPLC)
External links
@ref: 4391
culture collection no.: DSM 11500
straininfo link
- @ref: 86651
- straininfo: 49124
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 4391 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 11500) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-11500 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
| 86651 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID49124.1 | StrainInfo: A central database for resolving microbial strain identifiers |