Strain identifier

BacDive ID: 17439

Type strain: Yes

Species: Xanthobacter viscosus

Strain Designation: 7d

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 5.0 (current version):
version 4.1:
version 4.0:
version 3.0:
version 2.1:
version 2.0:
version 1.0:
version 5.0 (current version)

General

@ref: 15636

BacDive-ID: 17439

DSM-Number: 21355

keywords: Bacteria, 16S sequence, mesophilic

description: Xanthobacter viscosus 7d is a mesophilic bacterium that was isolated from activated sludge of a sewage purification system of the Baikal paper mill.

strain history: <- KCTC <- J. S. Lee <- VKM

doi: 10.13145/bacdive17439.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/proteobacteria
  • domain: Bacteria
  • phylum: Proteobacteria
  • class: Alphaproteobacteria
  • order: Hyphomicrobiales
  • family: Xanthobacteraceae
  • genus: Xanthobacter
  • species: Xanthobacter viscosus
  • full scientific name: Xanthobacter viscosus Doronina and Trotsenko 2003

@ref: 15636

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhizobiales

family: Xanthobacteraceae

genus: Xanthobacter

species: Xanthobacter viscosus

full scientific name: Xanthobacter viscosus Doronina and Trotsenko 2003

strain designation: 7d

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
15636Nutrient agar (NA)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium1.pdf
36739MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)

culture temp

@refgrowthtypetemperaturerange
15636positivegrowth30mesophilic
36739positivegrowth30mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 15636
  • sample type: activated sludge of a sewage purification system of the Baikal paper mill
  • geographic location: Baikal
  • country: Russia
  • origin.country: RUS
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Engineered#Waste#Activated sludge
#Engineered#Waste#Industrial wastewater

Safety information

risk assessment

  • @ref: 15636
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 15636
  • description: Xanthobacter viscosus 16S ribosomal RNA gene, partial sequence
  • accession: AF399970
  • length: 1384
  • database: ena
  • NCBI tax ID: 110

GC content

  • @ref: 15636
  • GC-content: 66.3

External links

@ref: 15636

culture collection no.: DSM 21355, ATCC BAA 298, KCTC 12306, VKM B-2253

straininfo link

@refpassport
20218http://www.straininfo.net/strains/304301
20218http://www.straininfo.net/strains/558346
20218http://www.straininfo.net/strains/304302

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
15636Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 21355)https://www.dsmz.de/collection/catalogue/details/culture/DSM-21355
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
36739Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/6087