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Strain identifier

BacDive ID: 17337

Type strain: Yes

Species: Vibrio fortis

Strain history: <- CAIM <- F. L. Thompson

NCBI tax ID(s): 212667 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 7931

BacDive-ID: 17337

DSM-Number: 19133

keywords: animal pathogen, mesophilic, aerobe, Bacteria, 16S sequence

description: Vibrio fortis DSM 19133 is an aerobe, mesophilic animal pathogen that was isolated from shrimp larvae.

NCBI tax id

  • NCBI tax id: 212667
  • Matching level: species

strain history: <- CAIM <- F. L. Thompson

doi: 10.13145/bacdive17337.20220920.7

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Vibrionales
  • family: Vibrionaceae
  • genus: Vibrio
  • species: Vibrio fortis
  • full scientific name: Vibrio fortis Thompson et al. 2003

@ref: 7931

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Vibrionales, not validated

family: Vibrionaceae

genus: Vibrio

species: Vibrio fortis

full scientific name: Vibrio fortis Thompson et al. 2003

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
7931BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)yeshttps://bacmedia.dsmz.de/medium/514Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
33910Marine agar (MA)yesDistilled water make up to (1000.000 ml);Marine agar (55.100 g)

culture temp

@refgrowthtypetemperaturerange
7931positivegrowth28mesophilic
33910positivegrowth30mesophilic
61089positivegrowth30-37mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 61089
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate-assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose+assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose+assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose+assimilation
683695291gelatin+hydrolysis
683694853esculin+hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose+fermentation
6836927897tryptophan+energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: +

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase+
68369beta-glucosidase+3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
7931+++--++++-+-++++-++-+

Isolation, sampling and environmental information

isolation

@refsample typehost speciescountryorigin.countrycontinentsampling date
7931shrimp (Litopenaeus vannamei) larvaeLitopenaeus vannameiEcuadorECUMiddle and South America
61089Shrimp larvae (Litopenaeus vannamei)EcuadorECUMiddle and South America1996

isolation source categories

  • Cat1: #Host
  • Cat2: #Arthropoda
  • Cat3: #Crustacea

Safety information

risk assessment

  • @ref: 7931
  • pathogenicity animal: yes
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 7931
  • description: Vibrio fortis partial 16S rRNA gene, type strain LMG 21557T
  • accession: AJ514916
  • length: 1505
  • database: ena
  • NCBI tax ID: 212667

External links

@ref: 7931

culture collection no.: DSM 19133, CAIM 629, CIP 108196, LMG 21557, CCUG 56780

straininfo link

@refpassport
20218http://www.straininfo.net/strains/701880
20218http://www.straininfo.net/strains/368962
20218http://www.straininfo.net/strains/841204
20218http://www.straininfo.net/strains/368961

literature

  • topic: Phylogeny
  • Pubmed-ID: 13130038
  • title: Vibrio fortis sp. nov. and Vibrio hepatarius sp. nov., isolated from aquatic animals and the marine environment.
  • authors: Thompson FL, Thompson CC, Hoste B, Vandemeulebroecke K, Gullian M, Swings J
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.02658-0
  • year: 2003
  • mesh: Animals, Base Composition, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/genetics, Fatty Acids/analysis, Marine Biology, Molecular Sequence Data, Phenotype, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Vibrio/*classification/genetics/*isolation & purification/metabolism
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
7931Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 19133)https://www.dsmz.de/collection/catalogue/details/culture/DSM-19133
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
33910Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/5791
61089Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 56780)https://www.ccug.se/strain?id=56780
68369Automatically annotated from API 20NE