Strain identifier
BacDive ID: 17276
Type strain:
Species: Vibrio vulnificus
Strain Designation: 324
Strain history: CIP <- 1975, M. Popoff, Inst. Pasteur, Paris, France <- J.L. Reichelt <- P. Baumann: strain 324 <- R.E. Weaver, CDC: strain 9107-79, group C2
NCBI tax ID(s): 1219061 (strain), 672 (species)
General
@ref: 3820
BacDive-ID: 17276
DSM-Number: 10143
keywords: genome sequence, 16S sequence, Bacteria, facultative anaerobe, mesophilic, motile
description: Vibrio vulnificus 324 is a facultative anaerobe, mesophilic, motile bacterium that was isolated from blood.
NCBI tax id
NCBI tax id | Matching level |
---|---|
672 | species |
1219061 | strain |
strain history
@ref | history |
---|---|
3820 | <- ATCC; ATCC 27562 <- P. Baumann; 324 <- R. E. Weaver; |
67770 | T. Shimada <-- ATCC 27562 <-- P. Baumann 324 <-- R. E. Weaver. |
123896 | CIP <- 1975, M. Popoff, Inst. Pasteur, Paris, France <- J.L. Reichelt <- P. Baumann: strain 324 <- R.E. Weaver, CDC: strain 9107-79, group C2 |
doi: 10.13145/bacdive17276.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Vibrionales
- family: Vibrionaceae
- genus: Vibrio
- species: Vibrio vulnificus
- full scientific name: Vibrio vulnificus (Reichelt et al. 1979) Farmer 1980
synonyms
- @ref: 20215
- synonym: Beneckea vulnifica
@ref: 3820
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Vibrionales, not validated
family: Vibrionaceae
genus: Vibrio
species: Vibrio vulnificus
full scientific name: Vibrio vulnificus (Reichelt et al. 1979) Farmer 1980 emend. West et al. 1986
strain designation: 324
type strain: yes
Morphology
cell morphology
@ref | motility | confidence | gram stain | cell shape |
---|---|---|---|---|
69480 | yes | 97.208 | ||
69480 | 99.978 | negative | ||
123896 | yes | negative | rod-shaped |
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
3820 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | yes | https://mediadive.dsmz.de/medium/92 | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water |
41867 | Marine agar (MA) | yes | Distilled water make up to (1000.000 ml);Marine agar (55.100 g) | |
3820 | BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) | yes | https://mediadive.dsmz.de/medium/514 | Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water |
3820 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://mediadive.dsmz.de/medium/693 | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
123896 | CIP Medium 13 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=13 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
3820 | positive | growth | 30 | mesophilic |
41867 | positive | growth | 30 | mesophilic |
67770 | positive | growth | 30 | mesophilic |
123896 | positive | growth | 15-37 | |
123896 | no | growth | 5 | psychrophilic |
123896 | no | growth | 41 | thermophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 123896
- oxygen tolerance: facultative anaerobe
spore formation
@ref | spore formation | confidence |
---|---|---|
69481 | no | 100 |
69480 | no | 99.972 |
compound production
- @ref: 3820
- compound: haemolysin
halophily
@ref | salt | growth | tested relation | concentration |
---|---|---|---|---|
123896 | NaCl | positive | growth | 2-4 % |
123896 | NaCl | no | growth | 0 % |
123896 | NaCl | no | growth | 6 % |
123896 | NaCl | no | growth | 8 % |
123896 | NaCl | no | growth | 10 % |
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68369 | 25115 | malate | + | assimilation |
68369 | 17128 | adipate | - | assimilation |
68369 | 27689 | decanoate | - | assimilation |
68369 | 24265 | gluconate | + | assimilation |
68369 | 17306 | maltose | + | assimilation |
68369 | 59640 | N-acetylglucosamine | - | assimilation |
68369 | 16899 | D-mannitol | - | assimilation |
68369 | 16024 | D-mannose | - | assimilation |
68369 | 30849 | L-arabinose | - | assimilation |
68369 | 17634 | D-glucose | + | assimilation |
68369 | 5291 | gelatin | + | hydrolysis |
68369 | 4853 | esculin | + | hydrolysis |
68369 | 16199 | urea | - | hydrolysis |
68369 | 29016 | arginine | - | hydrolysis |
68369 | 17634 | D-glucose | + | fermentation |
68369 | 27897 | tryptophan | + | energy source |
68369 | 17632 | nitrate | + | reduction |
68368 | 30849 | L-arabinose | - | fermentation |
68368 | 28053 | melibiose | - | fermentation |
68368 | 17992 | sucrose | - | fermentation |
68368 | 62345 | L-rhamnose | - | fermentation |
68368 | 30911 | sorbitol | - | fermentation |
68368 | 17268 | myo-inositol | - | fermentation |
68368 | 16899 | D-mannitol | - | fermentation |
68368 | 5291 | gelatin | + | hydrolysis |
68368 | 27897 | tryptophan | + | energy source |
68368 | 16199 | urea | - | hydrolysis |
68368 | 18257 | ornithine | + | degradation |
68368 | 25094 | lysine | + | degradation |
68368 | 29016 | arginine | - | hydrolysis |
123896 | 4853 | esculin | - | hydrolysis |
123896 | 17234 | glucose | + | fermentation |
123896 | 17716 | lactose | - | fermentation |
123896 | 17632 | nitrate | - | reduction |
123896 | 16301 | nitrite | - | reduction |
123896 | 132112 | sodium thiosulfate | - | builds gas from |
123896 | 17234 | glucose | + | degradation |
123896 | 17632 | nitrate | + | respiration |
antibiotic resistance
- @ref: 123896
- metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
- is antibiotic: yes
- is sensitive: yes
- is resistant: no
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
68369 | 35581 | indole | yes |
68368 | 15688 | acetoin | no |
68368 | 35581 | indole | yes |
68368 | 16136 | hydrogen sulfide | no |
123896 | 35581 | indole | yes |
metabolite tests
@ref | Chebi-ID | metabolite | indole test | voges-proskauer-test | methylred-test |
---|---|---|---|---|---|
68369 | 35581 | indole | + | ||
68368 | 15688 | acetoin | - | ||
68368 | 35581 | indole | + | ||
123896 | 15688 | acetoin | - | ||
123896 | 17234 | glucose | + |
enzymes
@ref | value | activity | ec |
---|---|---|---|
68369 | cytochrome oxidase | + | 1.9.3.1 |
68369 | gelatinase | + | |
68369 | beta-glucosidase | + | 3.2.1.21 |
68369 | urease | - | 3.5.1.5 |
68369 | arginine dihydrolase | - | 3.5.3.6 |
68368 | cytochrome oxidase | + | 1.9.3.1 |
68368 | gelatinase | + | |
68368 | tryptophan deaminase | - | 4.1.99.1 |
68368 | urease | - | 3.5.1.5 |
68368 | ornithine decarboxylase | + | 4.1.1.17 |
68368 | lysine decarboxylase | + | 4.1.1.18 |
68368 | arginine dihydrolase | - | 3.5.3.6 |
68368 | beta-galactosidase | + | 3.2.1.23 |
123896 | oxidase | + | |
123896 | beta-galactosidase | + | 3.2.1.23 |
123896 | alcohol dehydrogenase | - | 1.1.1.1 |
123896 | gelatinase | + | |
123896 | amylase | + | |
123896 | DNase | + | |
123896 | caseinase | + | 3.4.21.50 |
123896 | catalase | + | 1.11.1.6 |
123896 | tween esterase | + | |
123896 | gamma-glutamyltransferase | - | 2.3.2.2 |
123896 | lecithinase | + | |
123896 | lipase | + | |
123896 | lysine decarboxylase | + | 4.1.1.18 |
123896 | ornithine decarboxylase | + | 4.1.1.17 |
123896 | phenylalanine ammonia-lyase | + | 4.3.1.24 |
123896 | protease | + | |
123896 | tryptophan deaminase | - | |
123896 | urease | - | 3.5.1.5 |
68382 | alkaline phosphatase | + | 3.1.3.1 |
68382 | esterase (C 4) | + | |
68382 | esterase lipase (C 8) | + | |
68382 | lipase (C 14) | + | |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | valine arylamidase | + | |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | trypsin | - | 3.4.21.4 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | beta-galactosidase | + | 3.2.1.23 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | alpha-glucosidase | - | 3.2.1.20 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
123896 | - | + | + | + | + | + | + | - | - | - | + | + | - | + | - | - | - | + | - | - |
API 20E
@ref | ONPG | ADH Arg | LDC Lys | ODC | CIT | H2S | URE | TDA Trp | IND | VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
3820 | + | - | + | + | - | - | - | - | + | - | + | - | - | - | - | - | - | - | - | - | + |
3820 | + | - | + | + | - | - | - | - | + | - | + | - | - | - | - | - | - | - | - | - | + |
3820 | + | - | + | + | + | - | - | - | + | - | + | + | - | - | - | - | - | - | + | - | + |
3820 | + | - | + | + | + | - | - | - | + | - | + | + | - | - | - | - | - | - | + | - | + |
3820 | + | - | + | + | - | - | - | - | + | - | + | + | - | - | - | - | - | - | + | - | + |
API 20NE
@ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
3820 | + | + | + | - | - | + | + | + | + | - | - | - | - | + | + | - | - | + | + | - | + |
API biotype100
@ref | GLU | FRU | GAL | TRE | MNE | SBE | MEL | SAC | RAF | MTE | MAL | LAC | LTE | MbGa | MaGa | CEL | GEN | MbGu | ESC | RIB | ARA | XYL | PLE | RHA | FUC | MLZ | DARL | LARL | XLT | DUL | TAG | GLY | INO | MAN | MTL | TUR | SOR | ADO | HBG | LYX | ERY | MDG | 3MDG | SAT | MUC | LTAT | DTAT | MTAT | DMLT | LMLT | CATE | TATE | TTE | CIT | GRT | GAT | 2KG | 5KG | TRY | NAG | GNT | PAC | PAT | pOBE | QAT | GTE | mOBE | BAT | PPAT | CMT | TGE | BET | PCE | ABT | HIN | LAT | CAP | CYT | HIS | SUC | FUM | GRE | GYT | AVT | ETN | TTN | GLN | ITA | 3OBU | APT | GTT | PRO | DALA | LALA | SER | MNT | PROP | TYR | 2KT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
123896 | - | - | + | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | + | + | - | + | - | - | - | - | - | - | + | + | - | - | - | + | + | - | - | - |
Isolation, sampling and environmental information
isolation
@ref | sample type | geographic location | country | origin.country | continent |
---|---|---|---|---|---|
3820 | blood | ||||
67770 | Human blood | FL | USA | USA | North America |
123896 | Blood |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host Body Product | #Fluids | #Blood |
#Infection | #Patient |
Safety information
risk assessment
@ref | biosafety level | biosafety level comment |
---|---|---|
3820 | 2 | Risk group (German classification) |
123896 | 2 | Risk group (French classification) |
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Vibrio vulnificus DNA, 16S-23S intergenic spacer region ISR-1a, tRNA-Ala, partial and complete sequence | AB073875 | 498 | ena | 1219061 |
20218 | Vibrio vulnificus DNA, 16S-23S intergenic spacer region ISR-1b, tRNA-Glu, partial and complete sequence | AB073876 | 500 | ena | 1219061 |
20218 | Vibrio vulnificus DNA, 16S-23S intergenic spacer region ISR-2, tRNA-Ile, tRNA-Ala, partial and complete sequence | AB073877 | 584 | ena | 1219061 |
20218 | Vibrio vulnificus DNA, 16S-23S intergenic spacer region ISR-3, tRNA-Glu, tRNA-Lys, tRNA-Val, partial and complete sequence | AB073878 | 685 | ena | 1219061 |
20218 | Vibrio vulnificus DNA, 16S-23S intergenic spacer region ISR-4, tRNA-Glu, tRNA-Lys, tRNA-Ala, tRNA-Val, partial and complete sequence | AB073879 | 818 | ena | 1219061 |
20218 | Vibrio vulnificus clone 01_A01 16S ribosomal RNA gene, partial sequence | EF546244 | 1363 | ena | 672 |
20218 | Vibrio vulnificus clone 01_A03 16S ribosomal RNA gene, partial sequence | EF546245 | 1363 | ena | 672 |
20218 | Vibrio vulnificus clone 01_A10 16S ribosomal RNA gene, partial sequence | EF546246 | 1363 | ena | 672 |
20218 | Vibrio vulnificus clone 01_B09 16S ribosomal RNA gene, partial sequence | EF546247 | 1363 | ena | 672 |
20218 | Vibrio vulnificus strain ATCC 27562 clone 01_A10 16S ribosomal RNA gene, partial sequence | HM996960 | 1363 | ena | 1219061 |
20218 | Vibrio vulnificus strain ATCC 27562 clone 01_A01 16S ribosomal RNA gene, partial sequence | HM996963 | 1363 | ena | 1219061 |
20218 | Vibrio vulnificus NBRC 15645 = ATCC 27562 16S ribosomal RNA gene, partial sequence | KC768793 | 1361 | ena | 1219061 |
20218 | Vibrio vulnificus NBRC 15645 = ATCC 27562 16S ribosomal RNA gene, partial sequence | KC768825 | 644 | ena | 1219061 |
20218 | 16S rRNA [Vibrio vulnificus, ATCC 27562T, rRNA Partial, 23 nt, segment 3 of 3] | S83461 | 23 | ena | 1219061 |
20218 | Vibrio vulnificus ATCC 27562 16S small subunit rRNA gene, partial sequence | U10862 | 939 | ena | 1219061 |
20218 | V.vulnificus 16S ribosomal RNA | X56582 | 1474 | ena | 1219061 |
20218 | V.vulnificus (ATCC 27562T) gene for 16S ribosomal RNA | X74726 | 1466 | ena | 1219061 |
20218 | Vibrio vulnificus gene for 16S rRNA, partial sequence, strain: NBRC 15645 | AB680930 | 1468 | ena | 1219061 |
3820 | V.vulnificus (ATCC 27562 T) 16S rRNA gene | X76333 | 1536 | ena | 1219061 |
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Vibrio vulnificus NBRC 15645 = ATCC 27562 | GCA_002224265 | complete | ncbi | 1219061 |
66792 | Vibrio vulnificus NBRC 15645 = ATCC 27562 | GCA_001591065 | contig | ncbi | 1219061 |
66792 | Vibrio vulnificus NBRC 15645 = ATCC 27562 | 1219061.25 | wgs | patric | 1219061 |
66792 | Vibrio vulnificus NBRC 15645 = ATCC 27562 | 1219061.3 | wgs | patric | 1219061 |
66792 | Vibrio vulnificus NBRC 15645 = ATCC 27562 | 1219061.29 | complete | patric | 1219061 |
66792 | Vibrio vulnificus NBRC 15645 | 2675903639 | draft | img | 1219061 |
66792 | Vibrio vulnificus ATCC 27562 | 2897848256 | complete | img | 1219061 |
66792 | Vibrio vulnificus NBRC 15645, ATCC 27562 | 2547132173 | draft | img | 1219061 |
67770 | Vibrio vulnificus NBRC 15645 = ATCC 27562 | GCA_000299635 | contig | ncbi | 1219061 |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
spore-forming | no | 100 | no |
flagellated | yes | 91.99 | no |
gram-positive | no | 99.023 | no |
anaerobic | no | 97.555 | no |
aerobic | yes | 83.058 | no |
halophile | no | 53.022 | no |
spore-forming | no | 94.353 | no |
thermophile | no | 99.213 | yes |
glucose-util | yes | 88.041 | no |
glucose-ferment | yes | 86.505 | yes |
motile | yes | 93.677 | no |
External links
@ref: 3820
culture collection no.: DSM 10143, ATCC 27562, WDCM 00139, JCM 3725, BCRC 12905, CAIM 610, CCUG 13448, CCUG 16394, CDC 9107-79, CECT 529, CGMCC 1.3751, CIP 75.4, IFO 15645, KCTC 2959, LMG 13545, LMG 7898, NBRC 15645, NCIMB 2046, NRIC 0817, NCTC 13647
straininfo link
@ref | straininfo |
---|---|
86275 | 5128 |
86276 | 312383 |
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Pathogenicity | 6512503 | Evidence for the presence of a capsule in Vibrio vulnificus. | Amako K, Okada K, Miake S | J Gen Microbiol | 10.1099/00221287-130-10-2741 | 1984 | Blood Bactericidal Activity, Humans, Microscopy, Electron, Vibrio/immunology/*ultrastructure | |
Phylogeny | 7138004 | Vibrio vulnificus biogroup 2: new biogroup pathogenic for eels. | Tison DL, Nishibuchi M, Greenwood JD, Seidler RJ | Appl Environ Microbiol | 10.1128/aem.44.3.640-646.1982 | 1982 | Animals, Antigens, Bacterial/immunology, Antigens, Surface/immunology, DNA, Bacterial, Eels/*microbiology, Lethal Dose 50, Mice, Nucleic Acid Hybridization, Phenotype, Vibrio/classification/*pathogenicity/physiology | Phenotype |
Phylogeny | 9556752 | Molecular typing of Vibrio vulnificus isolates by random amplified polymorphic DNA (RAPD) analysis. | Ryang DW, Cho SW, Shin MG, Shin JH, Suh SP | Jpn J Med Sci Biol | 10.7883/yoken1952.50.113 | 1997 | *Random Amplified Polymorphic DNA Technique, Serotyping, Vibrio/*classification/genetics | |
Enzymology | 9720237 | Structure of a muramic acid containing capsular polysaccharide from the pathogenic strain of Vibrio vulnificus ATCC 27562. | Gunawardena S, Reddy GP, Wang Y, Kolli VS, Orlando R, Morris JG, Bush CA | Carbohydr Res | 10.1016/s0008-6215(98)00115-3 | 1998 | Bacteremia/microbiology, Carbohydrate Conformation, Carbohydrate Sequence, Chromatography, Gel, Humans, Molecular Sequence Data, Muramic Acids/*analysis, Nuclear Magnetic Resonance, Biomolecular, Oligosaccharides/*chemistry/isolation & purification, Polysaccharides, Bacterial/*chemistry/isolation & purification, Serine/analysis, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, Vibrio/*chemistry/isolation & purification/pathogenicity, Vibrio Infections/microbiology, Virulence | Phylogeny |
Pathogenicity | 10347079 | Response of pathogenic Vibrio species to high hydrostatic pressure. | Berlin DL, Herson DS, Hicks DT, Hoover DG | Appl Environ Microbiol | 10.1128/AEM.65.6.2776-2780.1999 | 1999 | Colony Count, Microbial, Disinfection/methods, Humans, *Hydrostatic Pressure, Vibrio/growth & development/isolation & purification/*physiology, Vibrio Infections/microbiology | Enzymology |
Pathogenicity | 16048966 | In vitro efficacy of the combination of ciprofloxacin and cefotaxime against Vibrio vulnificus. | Kim DM, Lym Y, Jang SJ, Han H, Kim YG, Chung CH, Hong SP | Antimicrob Agents Chemother | 10.1128/AAC.49.8.3489-3491.2005 | 2005 | Anti-Infective Agents/*pharmacology/standards, Cefotaxime/*pharmacology, Ciprofloxacin/*pharmacology, Colony Count, Microbial, Drug Synergism, Humans, Microbial Sensitivity Tests/methods, Minocycline/pharmacology, Vibrio vulnificus/*drug effects/growth & development | |
Pathogenicity | 16273036 | Immunization with major outer membrane protein of Vibrio vulnificus elicits protective antibodies in a murine model. | Jung CR, Park MJ, Heo MS | J Microbiol | 2278 | 2005 | Amino Acid Sequence, Animals, Antibodies, Bacterial/*blood, Bacterial Outer Membrane Proteins/administration & dosage/chemistry/*immunology, Bacterial Vaccines/administration & dosage/*immunology, Disease Models, Animal, Female, Humans, Mice, Mice, Inbred BALB C, Molecular Sequence Data, Rabbits, Specific Pathogen-Free Organisms, Vaccination, Vibrio Infections/immunology/*prevention & control, Vibrio vulnificus/*immunology | Genetics |
Phylogeny | 16625835 | Cloning, sequencing and analysis of the 16S-23S rDNA intergenic spacers (IGSs) of two strains of Vibrio vulnificus. | Deng XY, Chen XY, Wang ZX, Ou P, He JG | Yi Chuan Xue Bao | 10.1016/S0379-4172(06)60062-0 | 2006 | Cloning, Molecular, Conserved Sequence, DNA Primers, DNA, Bacterial/*genetics, DNA, Ribosomal Spacer/*genetics, Genes, Bacterial, Genetic Variation, Polymerase Chain Reaction/methods, RNA, Ribosomal, 16S/*genetics, RNA, Ribosomal, 23S/*genetics, RNA, Transfer/genetics, Sequence Analysis, DNA, Species Specificity, Vibrio vulnificus/classification/*genetics | Enzymology |
Metabolism | 16980431 | Validation of a green fluorescent protein-labeled strain of Vibrio vulnificus for use in the evaluation of postharvest strategies for handling of raw oysters. | Drake SL, Elhanafi D, Bang W, Drake MA, Green DP, Jaykus LA | Appl Environ Microbiol | 10.1128/AEM.01091-06 | 2006 | Animals, Biomarkers/metabolism, Colony Count, Microbial, Culture Media, Food Handling/*methods, Green Fluorescent Proteins/genetics/*metabolism, Hydrogen-Ion Concentration, Ostreidae/*virology, Shellfish, Temperature, Time Factors, Vibrio vulnificus/genetics/*growth & development/*metabolism | Cultivation |
Pathogenicity | 19413741 | Comparison of the effects of deferasirox, deferiprone, and deferoxamine on the growth and virulence of Vibrio vulnificus. | Neupane GP, Kim DM | Transfusion | 10.1111/j.1537-2995.2009.02186.x | 2009 | Benzoates/adverse effects/*pharmacology, Deferasirox, Deferiprone, Deferoxamine/adverse effects/*pharmacology, Humans, Iron Overload/drug therapy, Pyridones/adverse effects/*pharmacology, Siderophores/adverse effects/*pharmacology, Triazoles/adverse effects/*pharmacology, Vibrio Infections/chemically induced, *Vibrio vulnificus/growth & development/pathogenicity | |
Genetics | 19596808 | Integrase-directed recovery of functional genes from genomic libraries. | Rowe-Magnus DA | Nucleic Acids Res | 10.1093/nar/gkp561 | 2009 | Amino Acid Sequence, Bacterial Proteins/chemistry, *Genomic Library, Integrases/genetics/*metabolism, *Integrons, Molecular Sequence Data, Plasmids/genetics, Recombination, Genetic, Sequence Analysis, DNA, Vibrio vulnificus/genetics | Transcriptome |
Pathogenicity | 20059544 | Role of TLR4 in the host response to Vibrio vulnificus, an emerging pathogen. | Stamm LV | FEMS Immunol Med Microbiol | 10.1111/j.1574-695X.2009.00643.x | 2009 | Animals, Host-Pathogen Interactions, Male, Mice, Mice, Inbred C57BL, Mice, Knockout, Myeloid Differentiation Factor 88/genetics/*metabolism, Spleen/cytology/immunology, Toll-Like Receptor 4/genetics/*metabolism, Tumor Necrosis Factor-alpha/*biosynthesis/genetics, Vibrio Infections/*immunology/microbiology, Vibrio vulnificus/*immunology/pathogenicity | Metabolism |
Biotechnology | 20615341 | Immunomagnetic separation of Vibrio vulnificus with antiflagellar monoclonal antibody. | Jadeja R, Janes ME, Simonson JG | J Food Prot | 10.4315/0362-028x-73.7.1288 | 2010 | Animals, Antibodies, Bacterial, Antibodies, Monoclonal, Consumer Product Safety, Flagella/*immunology, Food Contamination/analysis, Food Microbiology, Humans, Immunomagnetic Separation/*methods, Mice, Mice, Inbred BALB C, Ostreidae/*microbiology, Shellfish/*microbiology, Vibrio vulnificus/*isolation & purification | Pathogenicity |
Metabolism | 20921143 | Evidence for the horizontal transfer of an unusual capsular polysaccharide biosynthesis locus in marine bacteria. | Nakhamchik A, Wilde C, Chong H, Rowe-Magnus DA | Infect Immun | 10.1128/IAI.00653-10 | 2010 | Bacterial Capsules/genetics/metabolism, Conserved Sequence/genetics, Gene Transfer, Horizontal/*genetics, Genes, Bacterial/genetics, Genome, Bacterial/genetics, Molecular Sequence Data, Muramic Acids/metabolism, Open Reading Frames/genetics, Polysaccharides, Bacterial/biosynthesis/*genetics/metabolism, Reverse Transcriptase Polymerase Chain Reaction, Shewanella putrefaciens/genetics, Vibrio vulnificus/*genetics/metabolism, Virulence Factors/biosynthesis/genetics | Genetics |
Genetics | 21404212 | High intragenomic heterogeneity of 16S rRNA genes in a subset of Vibrio vulnificus strains from the western Mediterranean coast. | Arias CR, Olivares-Fuster O, Goris J | Int Microbiol | 10.2436/20.1501.01.124 | 2010 | Animals, Bacterial Typing Techniques, Base Sequence, Bivalvia/microbiology, Consensus Sequence, *Genetic Variation, Genotype, Mediterranean Sea, Molecular Sequence Data, Nucleic Acid Conformation, Polymorphism, Restriction Fragment Length, Polymorphism, Single-Stranded Conformational, RNA, Bacterial/*genetics, RNA, Ribosomal, 16S/*genetics, Seawater/microbiology, Sequence Analysis, DNA, Spain, Vibrio vulnificus/*genetics | Phylogeny |
Enzymology | 21602152 | [Development of an immunochromatographic strip test for rapid detection of Vibrio vulnificus]. | Yan ZM, Zheng J, Chen Q, Shen H | Nan Fang Yi Ke Da Xue Xue Bao | 2011 | Animals, Antibodies, Bacterial/immunology, *Chromatography, Affinity, Gold Colloid, Rabbits, Reagent Strips, Sensitivity and Specificity, Vibrio vulnificus/immunology/*isolation & purification | Phylogeny | |
Genetics | 23209214 | Genome sequence of the human-pathogenic bacterium Vibrio vulnificus type strain ATCC 27562. | Li Z, Chen H, Chen X, Zhou T, Zhao L, Zhang C, Jin W | J Bacteriol | 10.1128/JB.01890-12 | 2012 | Base Sequence, DNA, Bacterial/genetics, *Genome, Bacterial, Molecular Sequence Data, RNA, Bacterial/genetics, Sequence Analysis, DNA, Sodium Chloride/metabolism, Vibrio vulnificus/classification/*genetics/isolation & purification | Transcriptome |
Metabolism | 24532589 | TLR2 and TLR4 mediate the TNFalpha response to Vibrio vulnificus biotype 1. | Stamm LV, Drapp RL | Pathog Dis | 10.1111/2049-632X.12154 | 2014 | Animals, Cells, Cultured, Male, Mice, Inbred C57BL, Mice, Knockout, Toll-Like Receptor 2/genetics/immunology/*metabolism, Toll-Like Receptor 4/genetics/immunology/*metabolism, Tumor Necrosis Factor-alpha/*immunology/*metabolism, Vibrio vulnificus/*immunology | Pathogenicity |
Phylogeny | 26788798 | Prevalence, characteristics and ecology of Vibrio vulnificus found in New Zealand shellfish. | Cruz CD, Chycka M, Hedderley D, Fletcher GC | J Appl Microbiol | 10.1111/jam.13064 | 2016 | Animals, Bivalvia/microbiology, Ecology, New Zealand, Ostreidae/microbiology, RNA, Ribosomal, 16S/genetics, Salinity, Seawater/chemistry/microbiology, Shellfish/*microbiology, Temperature, Vibrio vulnificus/genetics/*isolation & purification/physiology, Wound Infection/microbiology | Enzymology |
Genetics | 28860258 | Complete Genome Sequence of the Pathogenic Vibrio vulnificus Type Strain ATCC 27562. | Rusch DB, Rowe-Magnus DA | Genome Announc | 10.1128/genomeA.00907-17 | 2017 | ||
34759904 | Transcriptomic Analysis Reveals That Municipal Wastewater Effluent Enhances Vibrio vulnificus Growth and Virulence Potential. | Correa Velez KE, Norman RS | Front Microbiol | 10.3389/fmicb.2021.754683 | 2021 | |||
35159553 | Antibacterial Effect of Oregano Essential Oil against Vibrio vulnificus and Its Mechanism. | Luo K, Zhao P, He Y, Kang S, Shen C, Wang S, Guo M, Wang L, Shi C | Foods | 10.3390/foods11030403 | 2022 |
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
3820 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 10143) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-10143 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
41867 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/10738 | ||||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
68368 | Automatically annotated from API 20E | |||||
68369 | Automatically annotated from API 20NE | |||||
68382 | Automatically annotated from API zym | |||||
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | 10.21203/rs.3.rs-2527258/v1 | Predictions based on the model GenomeNet Sporulation v. 1 | |||
86275 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID5128.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
86276 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID312383.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
123896 | Curators of the CIP | Collection of Institut Pasteur (CIP 75.4) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2075.4 |