Strain identifier

BacDive ID: 17266

Type strain: No

Species: Vibrio parahaemolyticus

Strain Designation: MIII-2-5

Strain history: <- CCM <- E. Kampelmacher; MIII-2-5

NCBI tax ID(s): 670 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 1:
version 8.1 (current version)

General

@ref: 994

BacDive-ID: 17266

DSM-Number: 2172

keywords: Bacteria, mesophilic

description: Vibrio parahaemolyticus MIII-2-5 is a mesophilic bacterium that was isolated from mussels.

NCBI tax id

  • NCBI tax id: 670
  • Matching level: species

strain history

  • @ref: 994
  • history: <- CCM <- E. Kampelmacher; MIII-2-5

doi: 10.13145/bacdive17266.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Vibrionales
  • family: Vibrionaceae
  • genus: Vibrio
  • species: Vibrio parahaemolyticus
  • full scientific name: Vibrio parahaemolyticus (Fujino et al. 1951) Sakazaki et al. 1963 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Pasteurella parahaemolytica
    20215Beneckea parahaemolytica

@ref: 994

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Vibrionales, not validated

family: Vibrionaceae

genus: Vibrio

species: Vibrio parahaemolyticus

full scientific name: Vibrio parahaemolyticus (Fujino et al. 1951) Sakazaki et al. 1963 emend. West et al. 1986

strain designation: MIII-2-5

type strain: no

Culture and growth conditions

culture medium

  • @ref: 994
  • name: SEA WATER AGAR (DSMZ Medium 246)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/246
  • composition: Name: SEA WATER AGAR (DSMZ Medium 246) Composition: Agar 20.0 g/l Peptone 10.0 g/l Beef extract 10.0 g/l Tap water Sea water

culture temp

  • @ref: 994
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837418257ornithine+degradation
6837429016arginine-hydrolysis
6837425094lysine-degradation
6837416199urea-hydrolysis
6837418403L-arabitol-builds acid from
6837418024D-galacturonic acid-builds acid from
68374Potassium 5-ketogluconate-builds acid from
6837416899D-mannitol-builds acid from
6837417306maltose+builds acid from
6837415963ribitol-builds acid from
6837418394palatinose-builds acid from
6837415792malonate-assimilation
6837427897tryptophan+energy source
6837417634D-glucose+builds acid from
6837417992sucrose+builds acid from
6837430849L-arabinose-builds acid from
6837418333D-arabitol-builds acid from
6837427082trehalose+builds acid from
6837462345L-rhamnose-builds acid from
6837417268myo-inositol-builds acid from
6837417057cellobiose-builds acid from
6837430911sorbitol-builds acid from

metabolite production

  • @ref: 68374
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

  • @ref: 68374
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: +

enzymes

@refvalueactivityec
68374L-aspartate arylamidase-3.4.11.21
68374alpha-maltosidase+
68374alpha-galactosidase-3.2.1.22
68374alpha-glucosidase-3.2.1.20
68374beta-galactosidase-3.2.1.23
68374N-acetyl-beta-glucosaminidase-3.2.1.52
68374beta-glucuronidase-3.2.1.31
68374beta-glucosidase+3.2.1.21
68374lipase-
68374urease-3.5.1.5
68374lysine decarboxylase-4.1.1.18
68374arginine dihydrolase-3.5.3.6
68374ornithine decarboxylase+4.1.1.17

API ID32E

@refODCADH ArgLDC LysURELARLGAT5KGLIPRPbeta GLUMANMALADOPLEbeta GURMNTINDbeta NAGbeta GALGLUSACLARADARLalpha GLUalpha GALTRERHAINOCELSORalphaMALAspA
44825+-------++-+----+--++----+----+-

Isolation, sampling and environmental information

isolation

@refsample typecountryorigin.countrycontinent
994musselsNetherlandsNLDEurope
44825Mussels

isolation source categories

  • Cat1: #Host
  • Cat2: #Invertebrates (Other)
  • Cat3: #Mollusca

Safety information

risk assessment

  • @ref: 994
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

External links

@ref: 994

culture collection no.: DSM 2172, CCM 5940, CCUG 4990

straininfo link

  • @ref: 86265
  • straininfo: 47550

Reference

@idauthorscataloguedoi/urltitle
994Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 2172)https://www.dsmz.de/collection/catalogue/details/culture/DSM-2172
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
44825Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 4990)https://www.ccug.se/strain?id=4990
68374Automatically annotated from API ID32E
86265Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID47550.1StrainInfo: A central database for resolving microbial strain identifiers