Strain identifier
BacDive ID: 17256
Type strain:
Species: Vibrio alginolyticus
Strain Designation: 118, XII-53
Strain history: CIP <- 1989, NCIB <- 1972, P. Baumann: strain 118 <- ATCC <- Y. Miyamoto: strain XII-53, Oceanomonas alginolytica <- K. Nakumara
NCBI tax ID(s): 1219076 (strain), 663 (species)
General
@ref: 993
BacDive-ID: 17256
DSM-Number: 2171
keywords: genome sequence, 16S sequence, Bacteria, facultative anaerobe, mesophilic, Gram-negative, motile, rod-shaped, toxin production
description: Vibrio alginolyticus 118 is a facultative anaerobe, mesophilic, Gram-negative bacterium that produces toxins and was isolated from spoiled horse mackerel, causing food poisoning.
NCBI tax id
NCBI tax id | Matching level |
---|---|
1219076 | strain |
663 | species |
strain history
@ref | history |
---|---|
993 | <- CCM <- P. Baumann; 118 (Beneckea alginolytica) <- ATCC <- Y. Miyamoto; XII-53 (Oceanomonas alginolytica) <- K. Nakamura |
116231 | CIP <- 1989, NCIB <- 1972, P. Baumann: strain 118 <- ATCC <- Y. Miyamoto: strain XII-53, Oceanomonas alginolytica <- K. Nakumara |
doi: 10.13145/bacdive17256.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Vibrionales
- family: Vibrionaceae
- genus: Vibrio
- species: Vibrio alginolyticus
- full scientific name: Vibrio alginolyticus (Miyamoto et al. 1961) Sakazaki 1968 (Approved Lists 1980)
synonyms
@ref synonym 20215 Beneckea alginolytica 20215 Oceanomonas alginolytica
@ref: 993
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Vibrionales, not validated
family: Vibrionaceae
genus: Vibrio
species: Vibrio alginolyticus
full scientific name: Vibrio alginolyticus (Miyamoto et al. 1961) Sakazaki 1968
strain designation: 118, XII-53
type strain: yes
Morphology
cell morphology
- @ref: 116231
- gram stain: negative
- cell shape: rod-shaped
- motility: yes
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
993 | BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) | yes | https://mediadive.dsmz.de/medium/514 | Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water |
993 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://mediadive.dsmz.de/medium/693 | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
34248 | Marine agar (MA) | yes | Distilled water make up to (1000.000 ml);Marine agar (55.100 g) | |
41790 | Marine agar (MA) | yes | Distilled water make up to (1000.000 ml);Marine agar (55.100 g) | |
116231 | CIP Medium 13 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=13 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
993 | positive | growth | 30 | mesophilic |
34248 | positive | growth | 25 | mesophilic |
41790 | positive | growth | 37 | mesophilic |
116231 | positive | growth | 15-41 | |
116231 | no | growth | 5 | psychrophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 116231
- oxygen tolerance: facultative anaerobe
compound production
- @ref: 993
- compound: tetrodotoxin
halophily
@ref | salt | growth | tested relation | concentration |
---|---|---|---|---|
116231 | NaCl | positive | growth | 2-10 % |
116231 | NaCl | no | growth | 0 % |
metabolite utilization
@ref | metabolite | utilization activity | kind of utilization tested | Chebi-ID |
---|---|---|---|---|
68371 | Potassium 5-ketogluconate | - | builds acid from | |
68371 | Potassium 2-ketogluconate | - | builds acid from | |
68371 | gluconate | + | builds acid from | 24265 |
68371 | L-arabitol | - | builds acid from | 18403 |
68371 | D-arabitol | - | builds acid from | 18333 |
68371 | L-fucose | - | builds acid from | 18287 |
68371 | D-fucose | - | builds acid from | 28847 |
68371 | D-tagatose | - | builds acid from | 16443 |
68371 | D-lyxose | - | builds acid from | 62318 |
68371 | gentiobiose | - | builds acid from | 28066 |
68371 | xylitol | - | builds acid from | 17151 |
68371 | glycogen | + | builds acid from | 28087 |
68371 | starch | + | builds acid from | 28017 |
68371 | raffinose | - | builds acid from | 16634 |
68371 | melezitose | - | builds acid from | 6731 |
68371 | inulin | - | builds acid from | 15443 |
68371 | trehalose | + | builds acid from | 27082 |
68371 | sucrose | + | builds acid from | 17992 |
68371 | melibiose | - | builds acid from | 28053 |
68371 | lactose | - | builds acid from | 17716 |
68371 | maltose | + | builds acid from | 17306 |
68371 | cellobiose | + | builds acid from | 17057 |
68371 | esculin | - | builds acid from | 4853 |
68371 | arbutin | - | builds acid from | 18305 |
68371 | amygdalin | - | builds acid from | 27613 |
68371 | N-acetylglucosamine | + | builds acid from | 59640 |
68371 | methyl alpha-D-glucopyranoside | + | builds acid from | 320061 |
68371 | methyl alpha-D-mannoside | - | builds acid from | 43943 |
68371 | D-sorbitol | - | builds acid from | 17924 |
68371 | D-mannitol | + | builds acid from | 16899 |
68371 | myo-inositol | - | builds acid from | 17268 |
68371 | galactitol | - | builds acid from | 16813 |
68371 | L-rhamnose | - | builds acid from | 62345 |
68371 | L-sorbose | - | builds acid from | 17266 |
68371 | D-mannose | + | builds acid from | 16024 |
68371 | D-fructose | + | builds acid from | 15824 |
68371 | D-glucose | + | builds acid from | 17634 |
68371 | D-galactose | - | builds acid from | 12936 |
68371 | methyl beta-D-xylopyranoside | - | builds acid from | 74863 |
68371 | ribitol | - | builds acid from | 15963 |
68371 | L-xylose | - | builds acid from | 65328 |
68371 | D-xylose | - | builds acid from | 65327 |
68371 | D-ribose | + | builds acid from | 16988 |
68371 | L-arabinose | - | builds acid from | 30849 |
68371 | D-arabinose | - | builds acid from | 17108 |
68371 | erythritol | - | builds acid from | 17113 |
68371 | glycerol | + | builds acid from | 17754 |
68369 | malate | + | assimilation | 25115 |
68369 | adipate | - | assimilation | 17128 |
68369 | decanoate | - | assimilation | 27689 |
68369 | gluconate | + | assimilation | 24265 |
68369 | maltose | + | assimilation | 17306 |
68369 | N-acetylglucosamine | + | assimilation | 59640 |
68369 | D-mannitol | + | assimilation | 16899 |
68369 | D-mannose | + | assimilation | 16024 |
68369 | L-arabinose | - | assimilation | 30849 |
68369 | D-glucose | - | assimilation | 17634 |
68369 | gelatin | + | hydrolysis | 5291 |
68369 | esculin | - | hydrolysis | 4853 |
68369 | urea | - | hydrolysis | 16199 |
68369 | arginine | - | hydrolysis | 29016 |
68369 | D-glucose | - | fermentation | 17634 |
68369 | tryptophan | + | energy source | 27897 |
68369 | nitrate | + | reduction | 17632 |
68368 | L-arabinose | - | fermentation | 30849 |
68368 | melibiose | - | fermentation | 28053 |
68368 | L-rhamnose | - | fermentation | 62345 |
68368 | sorbitol | - | fermentation | 30911 |
68368 | myo-inositol | - | fermentation | 17268 |
68368 | urea | - | hydrolysis | 16199 |
68368 | ornithine | - | degradation | 18257 |
68368 | arginine | - | hydrolysis | 29016 |
116231 | citrate | - | carbon source | 16947 |
116231 | glucose | + | fermentation | 17234 |
116231 | lactose | - | fermentation | 17716 |
116231 | nitrate | + | reduction | 17632 |
116231 | nitrite | + | reduction | 16301 |
116231 | sodium thiosulfate | - | builds gas from | 132112 |
116231 | glucose | + | degradation | 17234 |
116231 | nitrate | + | respiration | 17632 |
antibiotic resistance
- @ref: 116231
- metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
- is antibiotic: yes
- is sensitive: yes
- is resistant: no
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
68369 | 35581 | indole | yes |
68368 | 16136 | hydrogen sulfide | no |
116231 | 35581 | indole | yes |
metabolite tests
@ref | Chebi-ID | metabolite | indole test | voges-proskauer-test | methylred-test |
---|---|---|---|---|---|
68369 | 35581 | indole | + | ||
116231 | 15688 | acetoin | + | ||
116231 | 17234 | glucose | + |
enzymes
@ref | value | activity | ec |
---|---|---|---|
68369 | cytochrome oxidase | + | 1.9.3.1 |
68369 | gelatinase | + | |
68369 | beta-glucosidase | - | 3.2.1.21 |
68369 | urease | - | 3.5.1.5 |
68369 | arginine dihydrolase | - | 3.5.3.6 |
68368 | cytochrome oxidase | + | 1.9.3.1 |
68368 | tryptophan deaminase | - | 4.1.99.1 |
68368 | urease | - | 3.5.1.5 |
68368 | ornithine decarboxylase | - | 4.1.1.17 |
68368 | arginine dihydrolase | - | 3.5.3.6 |
68368 | beta-galactosidase | - | 3.2.1.23 |
116231 | oxidase | + | |
116231 | beta-galactosidase | - | 3.2.1.23 |
116231 | alcohol dehydrogenase | - | 1.1.1.1 |
116231 | gelatinase | + | |
116231 | amylase | + | |
116231 | DNase | + | |
116231 | caseinase | + | 3.4.21.50 |
116231 | catalase | + | 1.11.1.6 |
116231 | tween esterase | + | |
116231 | gamma-glutamyltransferase | + | 2.3.2.2 |
116231 | lecithinase | + | |
116231 | lipase | + | |
116231 | lysine decarboxylase | + | 4.1.1.18 |
116231 | ornithine decarboxylase | - | 4.1.1.17 |
116231 | phenylalanine ammonia-lyase | + | 4.3.1.24 |
116231 | protease | + | |
116231 | tryptophan deaminase | - | |
116231 | urease | - | 3.5.1.5 |
68382 | alkaline phosphatase | + | 3.1.3.1 |
68382 | esterase (C 4) | + | |
68382 | esterase lipase (C 8) | + | |
68382 | lipase (C 14) | - | |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | valine arylamidase | - | |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | trypsin | + | 3.4.21.4 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | alpha-glucosidase | + | 3.2.1.20 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
116231 | - | + | + | + | - | + | - | - | + | - | + | + | - | - | - | + | - | + | - | - |
API 20E
@ref | ONPG | ADH Arg | LDC Lys | ODC | CIT | H2S | URE | TDA Trp | IND | VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
993 | - | - | - | - | + | - | - | - | - | + | +/- | - | - | - | - | - | - | - | - | - | + |
993 | - | - | + | - | + | - | - | - | + | + | + | + | + | - | - | - | + | - | + | - | + |
993 | - | - | + | - | + | - | - | - | + | + | + | + | + | - | - | - | + | - | + | - | + |
993 | - | - | + | - | - | - | - | - | + | - | + | + | + | - | - | - | + | - | + | - | + |
API 20NE
@ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
993 | + | + | - | - | - | - | + | + | - | - | + | + | + | + | + | - | - | + | - | - | + |
API 50CHac
@ref | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
116231 | + | - | - | - | + | - | - | - | - | - | + | + | + | - | - | - | - | + | - | - | + | + | - | - | - | +/- | + | + | - | - | + | + | - | - | - | + | + | - | - | +/- | - | - | - | - | - | - | + | - | - |
API biotype100
@ref | GLU | FRU | GAL | TRE | MNE | SBE | MEL | SAC | RAF | MTE | MAL | LAC | LTE | MbGa | MaGa | CEL | GEN | MbGu | ESC | RIB | ARA | XYL | PLE | RHA | FUC | MLZ | DARL | LARL | XLT | DUL | TAG | GLY | INO | MAN | MTL | TUR | SOR | ADO | HBG | LYX | ERY | MDG | 3MDG | SAT | MUC | LTAT | DTAT | MTAT | DMLT | LMLT | CATE | TATE | TTE | CIT | GRT | GAT | 2KG | 5KG | TRY | NAG | GNT | PAC | PAT | pOBE | QAT | GTE | mOBE | BAT | PPAT | CMT | TGE | BET | PCE | ABT | HIN | LAT | CAP | CYT | HIS | SUC | FUM | GRE | GYT | AVT | ETN | TTN | GLN | ITA | 3OBU | APT | GTT | PRO | DALA | LALA | SER | MNT | PROP | TYR | 2KT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
116231 | + | + | - | + | - | - | - | + | - | + | + | - | - | - | - | + | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | + | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | + | - | - | - | - | - | - | - | - | - | + | + | - | - | - | - | - | - | - | - | - | - | - | + | - | - | + | + | - | - | + | + | - | + | - | - | - | + | - | - | + | + | + | + | + | + | - | + | + | - |
Isolation, sampling and environmental information
isolation
@ref | sample type |
---|---|
993 | spoiled horse mackerel, causing food poisoning |
116231 | Animal, Spoiled horse mackerel causing food poisoning |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Engineered | #Food production | #Food |
#Host | #Other | #Decomposing animal |
#Host | #Fishes |
taxonmaps
- @ref: 69479
- File name: preview.99_89.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_14;96_71;97_74;98_81;99_89&stattab=map
- Last taxonomy: Vibrio
- 16S sequence: X74690
- Sequence Identity:
- Total samples: 5164
- soil counts: 169
- aquatic counts: 3075
- animal counts: 1856
- plant counts: 64
Safety information
risk assessment
@ref | biosafety level | biosafety level comment |
---|---|---|
993 | 2 | Risk group (German classification) |
116231 | 2 | Risk group (French classification) |
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Vibrio alginolyticus strain ATCC 17749 16S ribosomal RNA (rrs) gene, partial sequence | EU155488 | 892 | ena | 663 |
20218 | Vibrio alginolyticus 16S ribosomal RNA gene, partial sequence | HM771350 | 1471 | ena | 663 |
20218 | Vibrio alginolyticus strain ATCC 17749 16S ribosomal RNA gene, partial sequence | JN188412 | 1458 | ena | 663 |
20218 | V.alginolyticus 16S ribosomal RNA | X56576 | 1483 | ena | 663 |
20218 | V.alginolyticus (ATCC 17749T) gene for 16S ribosomal RNA | X74690 | 1468 | ena | 663 |
20218 | Vibrio alginolyticus strain CGMCC1.1833 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer region, complete sequence; and 23S ribosomal RNA gene, partial sequence | AY245204 | 250 | ena | 663 |
20218 | Vibrio alginolyticus strain CGMCC1.1833 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer region and tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence | AY245205 | 555 | ena | 663 |
20218 | Vibrio alginolyticus strain CGMCC1.1833 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer region, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence | AY245206 | 575 | ena | 663 |
20218 | Vibrio alginolyticus gene for 16S rRNA, partial sequence, strain: NBRC 15630 | AB680916 | 1478 | ena | 663 |
20218 | Vibrio alginolyticus 16S rRNA | D11192 | 217 | ena | 663 |
20218 | Vibrio alginolyticus 16S rRNA | D11241 | 209 | ena | 663 |
20218 | Vibrio alginolyticus 16S rRNA | D11290 | 192 | ena | 663 |
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Vibrio alginolyticus NBRC 15630 = ATCC 17749 | GCA_000354175 | contig | ncbi | 1219076 |
66792 | Vibrio alginolyticus NBRC 15630 = ATCC 17749 | GCA_000467145 | contig | ncbi | 1219076 |
66792 | Vibrio alginolyticus NBRC 15630 = ATCC 17749 | 1219076.12 | wgs | patric | 1219076 |
66792 | Vibrio alginolyticus NBRC 15630 = ATCC 17749 | 1219076.4 | wgs | patric | 1219076 |
66792 | Vibrio alginolyticus strain ATCC 17749 | 663.83 | wgs | patric | 663 |
66792 | Vibrio alginolyticus ATCC 17749 | 2563366623 | complete | img | 1219076 |
66792 | Vibrio alginolyticus ATCC 17749 | 2667527764 | draft | img | 663 |
GC content
- @ref: 993
- GC-content: 45.9
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
motile | yes | 90.969 | no |
flagellated | yes | 88.808 | no |
gram-positive | no | 98.399 | no |
anaerobic | no | 97.459 | no |
aerobic | yes | 93.313 | no |
halophile | no | 50 | no |
spore-forming | no | 94.147 | no |
glucose-util | yes | 86.474 | yes |
thermophile | no | 99.589 | yes |
glucose-ferment | yes | 88.509 | no |
External links
@ref: 993
culture collection no.: DSM 2171, ATCC 17749, CCM 2578, CIP 103336, CCUG 13445, NCTC 12160, NCIMB 1903
straininfo link
- @ref: 86255
- straininfo: 5048
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Phylogeny | 14768024 | Isolation and characterization of pathogenic Vibrio alginolyticus from diseased cobia Rachycentron canadum. | Liu PC, Lin JY, Hsiao PT, Lee KK | J Basic Microbiol | 10.1002/jobm.200310316 | 2004 | Animals, Ascites/microbiology, Bacterial Typing Techniques, Eye/pathology, Fish Diseases/*microbiology, Kidney/microbiology, Lethal Dose 50, Perciformes/*microbiology, Peritoneal Cavity/pathology, Skin/pathology, Sleep Stages, Stem Cells, Vibrio Infections/microbiology/pathology/*veterinary, Vibrio alginolyticus/classification/*isolation & purification/*pathogenicity/physiology, Virulence | Enzymology |
16348303 | Method designed to detect alginate-degrading bacteria. | Kitamikado M, Yamaguchi K, Tseng CH, Okabe B | Appl Environ Microbiol | 10.1128/aem.56.9.2939-2940.1990 | 1990 | |||
Genetics | 19244972 | Vibrio alginolyticus gyrB sequence analysis and gyrB-targeted PCR identification in environmental isolates. | Luo P, Hu C | Dis Aquat Organ | 10.3354/dao01984 | 2008 | Base Sequence, DNA Gyrase/*genetics, Genetic Variation, Molecular Sequence Data, Phylogeny, Polymerase Chain Reaction/*methods, Vibrio alginolyticus/*genetics/metabolism | Phylogeny |
Biotechnology | 24031378 | Adherence assays and Slime production of Vibrio alginolyticus and Vibrio parahaemolyticus. | Ben Abdallah F, Chaieb K, Zmantar T, Kallel H, Bakhrouf A | Braz J Microbiol | 10.1590/S1517-838220090002000033 | 2009 | ||
Enzymology | 24050202 | Structural and functional studies on three alginate lyases from Vibrio alginolyticus. | Deng S, Ye J, Xu Q, Zhang H | Protein Pept Lett | 10.2174/09298665113206660094 | 2014 | Amino Acid Sequence, Biocatalysis, Catalytic Domain, Enzyme Stability, Mutation, Polysaccharide-Lyases/*chemistry/genetics/*metabolism, Substrate Specificity, Temperature, Vibrio alginolyticus/*enzymology | Metabolism |
Enzymology | 24065565 | Pathogenic analysis of Vibrio alginolyticus infection in a mouse model. | Liu XF, Zhang H, Liu X, Gong Y, Chen Y, Cao Y, Hu C | Folia Microbiol (Praha) | 10.1007/s12223-013-0279-x | 2013 | Animals, Blood Chemical Analysis, Cytokines/blood, Disease Models, Animal, Enzymes/blood, Female, Histocytochemistry, Liver/pathology, Liver Function Tests, Lung/pathology, Mice, Mice, Inbred BALB C, Microscopy, Vibrio Infections/*microbiology/*pathology, Vibrio alginolyticus/*pathogenicity, Virulence | |
Genetics | 25635021 | Complete Genome Sequence of Vibrio alginolyticus ATCC 17749T. | Liu XF, Cao Y, Zhang HL, Chen YJ, Hu CJ | Genome Announc | 10.1128/genomeA.01500-14 | 2015 | ||
Phylogeny | 31280333 | Vibrio chemaguriensis sp. nov., from Sundarbans, Bay of Bengal. | Ghosh A, Bhadury P | Curr Microbiol | 10.1007/s00284-019-01731-7 | 2019 | Bays/*microbiology, DNA, Bacterial/genetics, Fatty Acids/chemistry, Genes, Bacterial/genetics, Genome, Bacterial/genetics, India, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Species Specificity, Vibrio/chemistry/*classification/genetics/growth & development | Genetics |
Phylogeny | 31880887 | Molecular Identification of Vibrio alginolyticus Causing Vibriosis in Shrimp and Its Herbal Remedy. | Abdul Hannan MD, Mahbubur Rahman MD, Nurunnabi Mondal MD, Suzan Chandra D, Chowdhury G, Tofazzal Islam MD | Pol J Microbiol | 10.33073/pjm-2019-042 | 2019 | Animals, Anti-Bacterial Agents/pharmacology, DNA, Bacterial/genetics, Food Preservation, Food Preservatives/*pharmacology, Microbial Sensitivity Tests, Penaeidae/growth & development/*microbiology, Plant Extracts/*pharmacology, Plants, Medicinal/*chemistry, RNA, Ribosomal, 16S/genetics, Shellfish/*microbiology, Vibrio alginolyticus/*drug effects/*genetics/growth & development/isolation & purification | Enzymology |
Phylogeny | 33503966 | Antimicrobial Activity of Lactococcus lactis subsp. lactis Isolated from a Stranded Cuvier's Beaked Whale (Ziphius cavirostris) against Gram-Positive and -Negative Bacteria. | Suzuki A, Suzuki M | Microorganisms | 10.3390/microorganisms9020243 | 2021 | ||
Biotechnology | 33836066 | Effect of Food Matrix Type on Growth Characteristics of and Hemolysin Production by Vibrio alginolyticus. | Wang R, Hu X, Deng Y, Gooneratne R | J Food Prot | 10.4315/JFP-20-490 | 2021 | Animals, Chickens, Hemolysin Proteins, *Ostreidae, Seafood, *Vibrio, Vibrio alginolyticus | |
36520169 | Genomic analysis and biological characterization of a novel Schitoviridae phage infecting Vibrio alginolyticus. | Tajuddin S, Khan AM, Chong LC, Wong CL, Tan JS, Ina-Salwany MY, Lau HY, Ho KL, Mariatulqabtiah AR, Tan WS | Appl Microbiol Biotechnol | 10.1007/s00253-022-12312-3 | 2022 |
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
993 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 2171) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-2171 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
34248 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/15122 | ||||
41790 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/7818 | ||||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
68368 | Automatically annotated from API 20E | |||||
68369 | Automatically annotated from API 20NE | |||||
68371 | Automatically annotated from API 50CH acid | |||||
68382 | Automatically annotated from API zym | |||||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
86255 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID5048.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
116231 | Curators of the CIP | Collection of Institut Pasteur (CIP 103336) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20103336 |