Strain identifier
BacDive ID: 17101
Type strain:
Species: Tsukamurella tyrosinosolvens
Strain history: CIP <- 2000, DSMZ <- A.F. Yassin: strain IMMIB D-1397
NCBI tax ID(s): 57704 (species)
General
@ref: 11496
BacDive-ID: 17101
DSM-Number: 44234
keywords: genome sequence, 16S sequence, Bacteria, aerobe, mesophilic
description: Tsukamurella tyrosinosolvens DSM 44234 is an aerobe, mesophilic bacterium that was isolated from clinical material; blood culture of a patient with cardiac pacemaker implants.
NCBI tax id
- NCBI tax id: 57704
- Matching level: species
strain history
@ref | history |
---|---|
11496 | <- A. F. Yassin, IMMIB D-1397 |
67770 | DSM 44234 <-- A. F. Yassin IMMIB D-1397. |
123704 | CIP <- 2000, DSMZ <- A.F. Yassin: strain IMMIB D-1397 |
doi: 10.13145/bacdive17101.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Mycobacteriales
- family: Tsukamurellaceae
- genus: Tsukamurella
- species: Tsukamurella tyrosinosolvens
- full scientific name: Tsukamurella tyrosinosolvens Yassin et al. 1997
synonyms
- @ref: 20215
- synonym: Tsukamurella carboxydivorans
@ref: 11496
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Tsukamurellaceae
genus: Tsukamurella
species: Tsukamurella tyrosinosolvens
full scientific name: Tsukamurella tyrosinosolvens Yassin et al. 1997 emend. Teng et al. 2016
type strain: yes
Morphology
cell morphology
@ref | motility | confidence | gram stain | cell shape |
---|---|---|---|---|
69480 | no | 93.183 | ||
69480 | 100 | positive | ||
123704 | no | positive | rod-shaped |
colony morphology
@ref | colony color | incubation period | medium used | hemolysis ability |
---|---|---|---|---|
20028 | Sand yellow (1002) | 10-14 days | ISP 2 | |
20028 | Beige (1001) | 10-14 days | ISP 3 | |
20028 | 10-14 days | ISP 4 | ||
20028 | Beige (1001) | 10-14 days | ISP 5 | |
20028 | Sand yellow (1002) | 10-14 days | ISP 6 | |
20028 | Beige (1001) | 10-14 days | ISP 7 | |
123704 | 1 |
multicellular morphology
@ref | forms multicellular complex | medium name |
---|---|---|
20028 | no | ISP 2 |
20028 | no | ISP 3 |
20028 | no | ISP 4 |
20028 | no | ISP 5 |
20028 | no | ISP 6 |
20028 | no | ISP 7 |
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
11496 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | yes | https://mediadive.dsmz.de/medium/535 | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water |
20028 | ISP 2 | yes | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |
20028 | ISP 3 | yes | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |
20028 | ISP 4 | yes | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |
20028 | ISP 5 | yes | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |
20028 | ISP 6 | yes | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | |
20028 | ISP 7 | yes | Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes | |
42109 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |
123704 | CIP Medium 72 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
11496 | positive | growth | 28 | mesophilic |
20028 | positive | optimum | 28 | mesophilic |
42109 | positive | growth | 30 | mesophilic |
54294 | positive | growth | 30-37 | mesophilic |
67770 | positive | growth | 28 | mesophilic |
123704 | positive | growth | 15-37 | |
123704 | no | growth | 10 | psychrophilic |
123704 | no | growth | 41 | thermophilic |
123704 | no | growth | 45 | thermophilic |
Physiology and metabolism
oxygen tolerance
@ref | oxygen tolerance |
---|---|
54294 | aerobe |
123704 | obligate aerobe |
spore formation
@ref | spore formation | confidence |
---|---|---|
69481 | no | 91 |
69480 | no | 99.964 |
halophily
@ref | salt | growth | tested relation | concentration |
---|---|---|---|---|
20028 | NaCl | positive | maximum | 7.5 % |
123704 | NaCl | positive | growth | 0-8 % |
123704 | NaCl | no | growth | 10 % |
observation
- @ref: 67770
- observation: quinones: MK-9, MK-8, MK-10
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
20028 | 17234 | glucose | + | |
20028 | 22599 | arabinose | - | |
20028 | 17992 | sucrose | + | |
20028 | 18222 | xylose | - | |
20028 | 17268 | myo-inositol | + | |
20028 | 29864 | mannitol | + | |
20028 | 28757 | fructose | + | |
20028 | 26546 | rhamnose | - | |
20028 | 16634 | raffinose | - | |
20028 | 62968 | cellulose | - | |
68368 | 30849 | L-arabinose | - | fermentation |
68368 | 27613 | amygdalin | - | fermentation |
68368 | 28053 | melibiose | - | fermentation |
68368 | 17992 | sucrose | - | fermentation |
68368 | 62345 | L-rhamnose | - | fermentation |
68368 | 30911 | sorbitol | - | fermentation |
68368 | 17268 | myo-inositol | - | fermentation |
68368 | 16899 | D-mannitol | - | fermentation |
68368 | 17634 | D-glucose | - | fermentation |
68368 | 5291 | gelatin | - | hydrolysis |
68368 | 27897 | tryptophan | - | energy source |
68368 | 16199 | urea | + | hydrolysis |
68368 | 16947 | citrate | + | assimilation |
68368 | 18257 | ornithine | + | degradation |
68368 | 25094 | lysine | + | degradation |
68368 | 29016 | arginine | + | hydrolysis |
123704 | 16947 | citrate | - | carbon source |
123704 | 4853 | esculin | + | hydrolysis |
123704 | 606565 | hippurate | - | hydrolysis |
123704 | 17632 | nitrate | - | reduction |
123704 | 16301 | nitrite | - | reduction |
123704 | 17632 | nitrate | - | respiration |
68379 | 17632 | nitrate | - | reduction |
68379 | 4853 | esculin | + | hydrolysis |
68379 | 16199 | urea | + | hydrolysis |
68379 | 5291 | gelatin | - | hydrolysis |
68379 | 17634 | D-glucose | - | fermentation |
68379 | 16988 | D-ribose | - | fermentation |
68379 | 65327 | D-xylose | - | fermentation |
68379 | 16899 | D-mannitol | - | fermentation |
68379 | 17306 | maltose | - | fermentation |
68379 | 17716 | lactose | - | fermentation |
68379 | 17992 | sucrose | - | fermentation |
68379 | 28087 | glycogen | - | fermentation |
antibiotic resistance
- @ref: 123704
- metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
- is antibiotic: yes
- is sensitive: yes
- is resistant: no
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
68368 | 15688 | acetoin | no |
68368 | 35581 | indole | no |
68368 | 16136 | hydrogen sulfide | no |
123704 | 35581 | indole | no |
metabolite tests
@ref | Chebi-ID | metabolite | voges-proskauer-test | indole test | methylred-test |
---|---|---|---|---|---|
68368 | 15688 | acetoin | - | ||
68368 | 35581 | indole | - | ||
123704 | 15688 | acetoin | - | ||
123704 | 17234 | glucose | - |
enzymes
@ref | value | activity | ec |
---|---|---|---|
68379 | gelatinase | - | |
68379 | urease | + | 3.5.1.5 |
68379 | beta-glucosidase | + | 3.2.1.21 |
68379 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68379 | alpha-glucosidase | + | 3.2.1.20 |
68379 | beta-galactosidase | + | 3.2.1.23 |
68379 | beta-glucuronidase | - | 3.2.1.31 |
68379 | alkaline phosphatase | + | 3.1.3.1 |
68379 | pyrrolidonyl arylamidase | + | 3.4.19.3 |
68379 | pyrazinamidase | - | 3.5.1.B15 |
68368 | gelatinase | - | |
68368 | tryptophan deaminase | - | 4.1.99.1 |
68368 | urease | + | 3.5.1.5 |
68368 | ornithine decarboxylase | + | 4.1.1.17 |
68368 | lysine decarboxylase | + | 4.1.1.18 |
68368 | arginine dihydrolase | + | 3.5.3.6 |
68368 | beta-galactosidase | - | 3.2.1.23 |
123704 | oxidase | - | |
123704 | beta-galactosidase | + | 3.2.1.23 |
123704 | alcohol dehydrogenase | - | 1.1.1.1 |
123704 | gelatinase | - | |
123704 | amylase | - | |
123704 | DNase | - | |
123704 | caseinase | - | 3.4.21.50 |
123704 | catalase | + | 1.11.1.6 |
123704 | tween esterase | + | |
123704 | gamma-glutamyltransferase | + | 2.3.2.2 |
123704 | lecithinase | - | |
123704 | lipase | - | |
123704 | lysine decarboxylase | - | 4.1.1.18 |
123704 | ornithine decarboxylase | - | 4.1.1.17 |
123704 | phenylalanine ammonia-lyase | - | 4.3.1.24 |
123704 | tryptophan deaminase | - | |
123704 | urease | - | 3.5.1.5 |
68382 | alkaline phosphatase | + | 3.1.3.1 |
68382 | esterase (C 4) | + | |
68382 | esterase lipase (C 8) | + | |
68382 | lipase (C 14) | + | |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | valine arylamidase | - | |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | trypsin | - | 3.4.21.4 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | alpha-glucosidase | + | 3.2.1.20 |
68382 | beta-glucosidase | + | 3.2.1.21 |
68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
API coryne
@ref | NIT | PYZ | PYRA | PAL | beta GUR | beta GAL | alpha GLU | beta NAG | ESC | URE | GEL | GLU | RIB | XYL | MAN | MAL | LAC | SAC | GLYG |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
20028 | - | - | + | + | - | + | + | - | + | + | - | - | - | - | - | - | - | - | - |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
123704 | - | + | + | + | + | + | - | - | - | - | + | + | - | - | - | + | + | - | - | - |
API 20E
@ref | ONPG | ADH Arg | LDC Lys | ODC | CIT | H2S | URE | TDA Trp | IND | VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
20028 | - | + | + | + | + | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - |
API biotype100
@ref | GLU | FRU | GAL | TRE | MNE | SBE | MEL | SAC | RAF | MTE | MAL | LAC | LTE | MbGa | MaGa | CEL | GEN | MbGu | ESC | RIB | ARA | XYL | PLE | RHA | FUC | MLZ | DARL | LARL | XLT | DUL | TAG | GLY | INO | MAN | MTL | TUR | SOR | ADO | HBG | LYX | ERY | MDG | 3MDG | SAT | MUC | LTAT | DTAT | MTAT | DMLT | LMLT | CATE | TATE | TTE | CIT | GRT | GAT | 2KG | 5KG | TRY | NAG | GNT | PAC | PAT | pOBE | QAT | GTE | mOBE | BAT | PPAT | CMT | TGE | BET | PCE | ABT | HIN | LAT | CAP | CYT | HIS | SUC | FUM | GRE | GYT | AVT | ETN | TTN | GLN | ITA | 3OBU | APT | GTT | PRO | DALA | LALA | SER | MNT | PROP | TYR | 2KT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
123704 | + | + | + | + | + | - | - | + | - | - | + | - | - | - | - | - | - | - | - | - | - | - | + | - | + | + | + | - | - | - | - | - | + | + | + | + | + | - | - | - | - | + | - | - | - | - | - | - | - | + | + | - | - | + | - | - | + | - | - | + | + | + | - | - | - | - | - | + | - | - | - | - | + | - | - | + | - | + | - | + | + | - | - | - | + | - | + | - | + | + | + | + | + | + | + | - | + | + | - |
Isolation, sampling and environmental information
isolation
@ref | sample type | geographic location | country | origin.country | continent |
---|---|---|---|---|---|
11496 | clinical material; blood culture of a patient with cardiac pacemaker implants | Bochum | Germany | DEU | Europe |
54294 | Human blood | ||||
67770 | Blood culture from a 62-year-old woman who had cardiac pacemaker implants | ||||
123704 | Human, Blood |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Infection | #Medical environment | #Clinic |
#Infection | #Patient | #Blood culture |
taxonmaps
- @ref: 69479
- File name: preview.99_3845.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_10;96_1974;97_2373;98_2929;99_3845&stattab=map
- Last taxonomy: Tsukamurella
- 16S sequence: Y12246
- Sequence Identity:
- Total samples: 12359
- soil counts: 3431
- aquatic counts: 2978
- animal counts: 5160
- plant counts: 790
Safety information
risk assessment
@ref | biosafety level | biosafety level comment |
---|---|---|
11496 | 2 | Risk group (German classification) |
20028 | 2 | German classification |
123704 | 1 | Risk group (French classification) |
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Tsukamurella tyrosinosolvens strain DSM 44234 16S ribosomal RNA, complete sequence | AY238514 | 1512 | ena | 57704 |
67770 | Tsukamurella tyrosinosolvens 16S rRNA gene, isolate D-1397 | Y12246 | 1460 | ena | 57704 |
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Tsukamurella tyrosinosolvens NCTC13231 | GCA_900637875 | complete | ncbi | 57704 |
66792 | Tsukamurella tyrosinosolvens strain CCUG 38499 | 57704.13 | wgs | patric | 57704 |
66792 | Tsukamurella tyrosinosolvens strain DSM 44234 | 57704.16 | wgs | patric | 57704 |
66792 | Tsukamurella tyrosinosolvens strain NCTC13231 | 57704.19 | complete | patric | 57704 |
66792 | Tsukamurella tyrosinosolvens DSM 44234 | 2639762617 | draft | img | 57704 |
66792 | Tsukamurella tyrosinosolvens CCUG 38499 | 2667527978 | draft | img | 57704 |
67770 | Tsukamurella tyrosinosolvens DSM 44234 | GCA_900104775 | contig | ncbi | 57704 |
67770 | Tsukamurella tyrosinosolvens CCUG 38499 | GCA_001575155 | contig | ncbi | 57704 |
GC content
@ref | GC-content | method |
---|---|---|
11496 | 71.2 | sequence analysis |
67770 | 71.2 | genome sequence analysis |
67770 | 73.6 | high performance liquid chromatography (HPLC) |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
spore-forming | no | 91 | no |
flagellated | no | 97.39 | no |
gram-positive | yes | 87.682 | no |
anaerobic | no | 99.616 | no |
aerobic | yes | 92.573 | no |
halophile | no | 93.569 | no |
spore-forming | no | 86.839 | no |
thermophile | no | 98.978 | yes |
glucose-util | yes | 92.297 | no |
motile | no | 92.944 | no |
glucose-ferment | no | 90.552 | yes |
External links
@ref: 11496
culture collection no.: DSM 44234, CCUG 38499, CIP 106771, JCM 10112, IMMIB D-1397, IFM 0810, KCTC 19177, KCTC 9965, NCTC 13231, PCM 2579
straininfo link
- @ref: 86101
- straininfo: 50526
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Phylogeny | 9226890 | Tsukamurella tyrosinosolvens sp. nov. | Yassin AF, Rainey FA, Burghardt J, Brzezinka H, Schmitt S, Seifert P, Zimmermann O, Mauch H, Gierth D, Lux I, Schaal KP | Int J Syst Bacteriol | 10.1099/00207713-47-3-607 | 1997 | Actinomycetales/*classification/*genetics/ultrastructure, Actinomycetales Infections/*microbiology, Bacterial Proteins/analysis, Blood/microbiology, Chromatography, Thin Layer, DNA, Bacterial/analysis, DNA, Ribosomal/analysis, Humans, Lipids/analysis, Microscopy, Electron, Scanning, Molecular Sequence Data, Phylogeny | Pathogenicity |
Phylogeny | 19502350 | Tsukamurella carboxydivorans sp. nov., a carbon monoxide-oxidizing actinomycete. | Park SW, Kim SM, Park ST, Kim YM | Int J Syst Evol Microbiol | 10.1099/ijs.0.005959-0 | 2009 | Actinomycetales/*classification/genetics/isolation & purification/physiology, Bacterial Typing Techniques, Base Composition, Carbon Monoxide/*metabolism, DNA, Bacterial/analysis, Fatty Acids/analysis, Genotype, Korea, Molecular Sequence Data, Nucleic Acid Hybridization, Oxidation-Reduction, Phenotype, Phylogeny, Polymerase Chain Reaction/methods, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Species Specificity | Genetics |
Phylogeny | 19734289 | Tsukamurella soli sp. nov., isolated from soil. | Weon HY, Yoo SH, Anandham R, Schumann P, Kroppenstedt RM, Kwon SW, Stackebrandt E | Int J Syst Evol Microbiol | 10.1099/ijs.0.014852-0 | 2009 | Actinomycetales/*classification/genetics/isolation & purification/physiology, Base Composition, Base Sequence, Fatty Acids/analysis, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, *Soil Microbiology | Genetics |
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
11496 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44234) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-44234 | |||
20028 | Wink, J. | http://www.dsmz.de/microorganisms/wink_pdf/DSM44234.pdf | Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
42109 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/18938 | ||||
54294 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 38499) | https://www.ccug.se/strain?id=38499 | |||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
68368 | Automatically annotated from API 20E | |||||
68379 | Automatically annotated from API Coryne | |||||
68382 | Automatically annotated from API zym | |||||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | 10.21203/rs.3.rs-2527258/v1 | Predictions based on the model GenomeNet Sporulation v. 1 | |||
86101 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID50526.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
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