Archive BacDiveID:10.13145/bacdive170243.20250331.9.3

Strain identifier

BacDive ID: 170243

Type strain:

Species: Haladaptatus salinisoli

Strain Designation: PSR8

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 20215

BacDive-ID: 170243

keywords: genome sequence, 16S sequence, Archaea

description: Haladaptatus salinisoli PSR8 is an archaeon of the family Halobacteriaceae.

doi: 10.13145/bacdive170243.20250331.9.3

@ref: 20215

domain: Archaea

phylum: Euryarchaeota

class: Halobacteria

order: Halobacteriales

family: Halobacteriaceae

genus: Haladaptatus

species: Haladaptatus salinisoli

full scientific name: Haladaptatus salinisoli Xin et al. 2022

strain designation: PSR8

type strain: yes

@ref: 20215
description: Haladaptatus salinisoli strain PSR8 16S ribosomal RNA gene, partial sequence
accession: MK680098
length: 1472
database: nuccore
NCBI tax ID: 2884876

@ref	model	trait	description	prediction	confidence	training_data
125438	gram-positive	gram-positive	Positive reaction to Gram-staining	no	74.301	no
125438	anaerobic	anaerobic	Ability to grow under anoxygenic conditions (including facultative anaerobes)	no	83.407	no
125438	aerobic	aerobic	Ability to grow under oxygenic conditions (including facultative aerobes)	yes	83.315	no
125438	spore-forming	spore-forming	Ability to form endo- or exospores	no	80.481	no
125438	thermophile	thermophilic	Ability to grow at temperatures above or equal to 45°C	no	72.65	no
125438	motile2+	flagellated	Ability to perform flagellated movement	no	86	no
125439	BacteriaNet	spore_formation	Ability to form endo- or exospores	no	91.8
125439	BacteriaNet	motility	Ability to perform movement	no	56.5
125439	BacteriaNet	gram_stain	Reaction to gram-staining	negative	89.2
125439	BacteriaNet	oxygen_tolerance	Oxygenic conditions needed for growth	aerobe	79.3

@ref: 20215

culture collection no.: CGMCC 1.17025, JCM 34142

topic: Phylogeny
Pubmed-ID: 36256551
title: Haladaptatus halobius sp. nov. and Haladaptatus salinisoli sp. nov., two extremely halophilic archaea isolated from Gobi saline soil.
authors: Xin YJ, Bao CX, Tan S, Hou J, Cui HL
journal: Int J Syst Evol Microbiol
DOI: 10.1099/ijsem.0.005543
year: 2022
mesh: RNA, Ribosomal, 16S/genetics, Phylogeny, *Soil, DNA, Archaeal/genetics, Base Composition, Sequence Analysis, DNA, Fatty Acids/chemistry, DNA, Bacterial/genetics, Bacterial Typing Techniques, *Halobacteriaceae, Glycolipids/chemistry, Sulfates, Phosphatidylglycerols/analysis, Nucleotides, Amino Acids, Phosphatidic Acids/analysis, Esters
topic2: Transcriptome

@id	authors	title	doi/url
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ	10.1099/ijsem.0.004332
66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann	Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)	https://diaspora-project.de/progress.html#genomes
125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann	Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets	10.1101/2024.08.12.607695
125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy	deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1	https://github.com/GenomeNet/deepG