Strain identifier
BacDive ID: 169742
Type strain: 
Species: Adlercreutzia aquisgranensis
Strain Designation: Cla-RA-2, CLA-SR-PSM1-47, RA2
Strain history: <- T. Clavel, RWTH Aachen; CLA-SR-PSM1-47
NCBI tax ID(s): 2941323 (species)
version 9.3 (current version)
General
@ref: 69161
BacDive-ID: 169742
DSM-Number: 108611
keywords: genome sequence, Bacteria, mesophilic
description: Adlercreutzia aquisgranensis Cla-RA-2 is a mesophilic bacterium that was isolated from gut content; wild mouse.
NCBI tax id
- NCBI tax id: 2941323
- Matching level: species
strain history
- @ref: 69161
- history: <- T. Clavel, RWTH Aachen; CLA-SR-PSM1-47
doi: 10.13145/bacdive169742.20250331.9.3
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Coriobacteriia
- order: Eggerthellales
- family: Eggerthellaceae
- genus: Adlercreutzia
- species: Adlercreutzia aquisgranensis
- full scientific name: Adlercreutzia aquisgranensis Afrizal et al. 2024
@ref: 69161
domain: Bacteria
phylum: Actinobacteria
class: Coriobacteriia
order: Eggerthellales
family: Eggerthellaceae
genus: Adlercreutzia
species: Adlercreutzia aquisgranensis
full scientific name: Adlercreutzia aquisgranensis
strain designation: Cla-RA-2, CLA-SR-PSM1-47, RA2
type strain: yes
Morphology
cell morphology
- @ref: 125439
- gram stain: negative
- confidence: 93.8
Culture and growth conditions
culture medium
- @ref: 69161
- name: WILKINS-CHALGREN ANAEROBE BROTH (DSMZ Medium 339)
- growth: yes
- link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium339.pdf
culture temp
- @ref: 69161
- growth: positive
- type: growth
- temperature: 37
Physiology and metabolism
spore formation
- @ref: 125439
- spore formation: no
- confidence: 98.7
Isolation, sampling and environmental information
isolation
- @ref: 69161
- sample type: gut content; wild mouse
- geographic location: Aachen
- country: Germany
- origin.country: DEU
- continent: Europe
Sequence information
Genome sequences
- @ref: 66792
- description: Adlercreutzia sp. DSM 108611 Adlercreutzia_sp_nov3_DSM108611
- accession: GCA_943193145
- assembly level: contig
- database: ncbi
- NCBI tax ID: 2941323
Genome-based predictions
predictions
| @ref | model | trait | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 81.852 | no |
| 125438 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | yes | 86.894 | no |
| 125438 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 77.377 | no |
| 125438 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 93.522 | no |
| 125438 | thermophile | thermophilic | Ability to grow at temperatures above or equal to 45°C | no | 91.319 | yes |
| 125438 | motile2+ | flagellated | Ability to perform flagellated movement | no | 86.5 | no |
| 125439 | BacteriaNet | spore_formation | Ability to form endo- or exospores | no | 98.7 | |
| 125439 | BacteriaNet | motility | Ability to perform movement | yes | 85.7 | |
| 125439 | BacteriaNet | gram_stain | Reaction to gram-staining | negative | 93.8 | |
| 125439 | BacteriaNet | oxygen_tolerance | Oxygenic conditions needed for growth | anaerobe | 82.3 |
External links
@ref: 69161
culture collection no.: DSM 108611
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69161 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-108611 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 108611) | |
| 125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann | Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets | 10.1101/2024.08.12.607695 | |
| 125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy | deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 | https://github.com/GenomeNet/deepG |