Strain identifier
BacDive ID: 169741
Type strain: 
Species: Acetatifactor aquisgranensis
Strain Designation: CLA-AA-M01, SCP101-BHI2-D7
Strain history: <- T. Clavel, RWTH Aachen; <- T. Clavel, RWTH Aachen; CLA-AA-M01
General
@ref: 69160
BacDive-ID: 169741
DSM-Number: 110981
keywords: genome sequence, Bacteria, mesophilic
description: Acetatifactor aquisgranensis CLA-AA-M01 is a mesophilic bacterium that was isolated from caecal content; SPF, female, C57BL/6J mouse.
strain history
- @ref: 69160
- history: <- T. Clavel, RWTH Aachen; <- T. Clavel, RWTH Aachen; CLA-AA-M01
doi: 10.13145/bacdive169741.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Lachnospiraceae
- genus: Acetatifactor
- species: Acetatifactor aquisgranensis
- full scientific name: Acetatifactor aquisgranensis Afrizal et al. 2022
@ref: 69160
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Eubacteriales
family: Lachnospiraceae
genus: Acetatifactor
species: Acetatifactor aquisgranensis
full scientific name: Acetatifactor aquisgranensis
strain designation: CLA-AA-M01, SCP101-BHI2-D7
type strain: no
Culture and growth conditions
culture medium
- @ref: 69160
- name: BHI MEDIUM (DSMZ Medium 215)
- growth: yes
- link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium215.pdf
culture temp
- @ref: 69160
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 69160
- sample type: caecal content; SPF, female, C57BL/6J mouse
- geographic location: Aachen
- country: Germany
- origin.country: DEU
- continent: Europe
Sequence information
Genome sequences
- @ref: 66792
- description: Acetatifactor aquisgranensis DSM 110981
- accession: GCA_943193215
- assembly level: contig
- database: ncbi
- NCBI tax ID: 2941233
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| flagellated | no | 66.347 | no |
| gram-positive | yes | 81.916 | no |
| anaerobic | yes | 97.659 | no |
| halophile | no | 87.412 | no |
| spore-forming | yes | 81.239 | no |
| thermophile | no | 95.08 | no |
| glucose-util | yes | 88.573 | no |
| motile | yes | 73.243 | no |
| aerobic | no | 96.704 | no |
| glucose-ferment | yes | 70.559 | no |
External links
@ref: 69160
culture collection no.: DSM 110981
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69160 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-110981 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 110981) |