Strain identifier

BacDive ID: 168740

Type strain: Yes

Species: Rhizobium populi

Strain Designation: K-38

NCBI tax ID(s): 1312132 (species)

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For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 20215

BacDive-ID: 168740

keywords: 16S sequence, Bacteria

description: Rhizobium populi K-38 is a bacterium of the family Rhizobiaceae.

NCBI tax id

  • NCBI tax id: 1312132
  • Matching level: species

doi: 10.13145/bacdive168740.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Hyphomicrobiales
  • family: Rhizobiaceae
  • genus: Rhizobium
  • species: Rhizobium populi
  • full scientific name: Rhizobium populi Rozahon et al. 2014

  • synonyms

    • @ref: 20215
    • synonym: Ectorhizobium populi

@ref: 20215

domain: Bacteria

phylum: Pseudomonadota

class: Alphaproteobacteria

order: Hyphomicrobiales

family: Rhizobiaceae

genus: Rhizobium

species: Rhizobium populi

full scientific name: Rhizobium populi Rozahon et al. 2014

strain designation: K-38

type strain: yes

Isolation, sampling and environmental information

taxonmaps

  • @ref: 69479
  • File name: preview.99_19366.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_5;96_6;97_2049;98_14639;99_19366&stattab=map
  • Last taxonomy: Rhizobium
  • 16S sequence: KC609734
  • Sequence Identity:
  • Total samples: 2318
  • soil counts: 609
  • aquatic counts: 590
  • animal counts: 598
  • plant counts: 521

Safety information

risk assessment

  • @ref: 20215
  • biosafety level: 1
  • biosafety level comment: Risk group

Sequence information

16S sequences

  • @ref: 20215
  • description: Rhizobium populi strain K-38 16S ribosomal RNA gene, partial sequence
  • accession: KC609734
  • length: 1435
  • database: nuccore
  • NCBI tax ID: 1312132

External links

@ref: 20215

culture collection no.: CCTCC AB 2013068, NRRL B-59990, JCM 19159

literature

  • topic: Phylogeny
  • Pubmed-ID: 24972613
  • title: Rhizobium populi sp. nov., an endophytic bacterium isolated from Populus euphratica.
  • authors: Rozahon M, Ismayil N, Hamood B, Erkin R, Abdurahman M, Mamtimin H, Abdukerim M, Lal R, Rahman E
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.061416-0
  • year: 2014
  • mesh: Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Genes, Bacterial, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, Populus/*microbiology, RNA, Ribosomal, 16S/genetics, Rhizobium/*classification/genetics/isolation & purification, Sequence Analysis, DNA
  • topic2: Genetics

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/