Strain identifier
BacDive ID: 16854
Type strain: 
Species: Pyrococcus furiosus
Strain Designation: Vc 1
Strain history: DSM 3638 <-- K. O. Stetter and G. Fiala Vc 1.
NCBI tax ID(s): 186497 (strain), 2261 (species)
version 8.1 (current version)
General
@ref: 1428
BacDive-ID: 16854
DSM-Number: 3638
keywords: genome sequence, 16S sequence, Archaea, anaerobe, hyperthermophilic, Gram-negative
description: Pyrococcus furiosus Vc 1 is an anaerobe, hyperthermophilic, Gram-negative archaeon that was isolated from geothermally heated marine sediment.
NCBI tax id
| NCBI tax id | Matching level |
|---|---|
| 2261 | species |
| 186497 | strain |
strain history
| @ref | history |
|---|---|
| 1428 | <- K.O. Stetter and G. Fiala, Vc 1 |
| 67770 | DSM 3638 <-- K. O. Stetter and G. Fiala Vc 1. |
doi: 10.13145/bacdive16854.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/methanobacteriota
- domain: Archaea
- phylum: Methanobacteriota
- class: Thermococci
- order: Thermococcales
- family: Thermococcaceae
- genus: Pyrococcus
- species: Pyrococcus furiosus
- full scientific name: Pyrococcus furiosus Fiala and Stetter 1986
@ref: 1428
domain: Archaea
phylum: Euryarchaeota
class: Thermococci
order: Thermococcales
family: Thermococcaceae
genus: Pyrococcus
species: Pyrococcus furiosus
full scientific name: Pyrococcus furiosus Fiala and Stetter 1986
strain designation: Vc 1
type strain: yes
Morphology
cell morphology
- @ref: 69480
- gram stain: negative
- confidence: 99.951
Culture and growth conditions
culture medium
- @ref: 1428
- name: PYROCOCCUS MEDIUM (DSMZ Medium 377)
- growth: yes
- link: https://mediadive.dsmz.de/medium/377
- composition: Name: PYROCOCCUS MEDIUM (DSMZ Medium 377) Composition: Sulfur 30.0 g/l Peptone 5.0 g/l MgCl2 x 6 H2O 2.75 g/l Yeast extract 1.0 g/l KH2PO4 0.5 g/l Na2S x 9 H2O 0.5 g/l KCl 0.33 g/l NaBr 0.05 g/l MgSO4 x 7 H2O 0.03 g/l Nitrilotriacetic acid 0.015 g/l NaCl 0.01 g/l (NH4)2SO4 0.01 g/l SrCl2 x 6 H2O 0.007 g/l Citric acid 0.005 g/l MnSO4 x H2O 0.005 g/l CoSO4 x 7 H2O 0.0018 g/l ZnSO4 x 7 H2O 0.0018 g/l CaCl2 x 2 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Sodium resazurin 0.0005 g/l NiCl2 x 6 H2O 0.0003 g/l AlK(SO4)2 x 12 H2O 0.0002 g/l CuSO4 x 5 H2O 0.0001 g/l Na2MoO4 x 2 H2O 0.0001 g/l H3BO3 0.0001 g/l KI 5e-05 g/l Na2WO4 x 2 H2O 4e-06 g/l Na2SeO3 x 5 H2O 3e-06 g/l Distilled water
culture temp
| @ref | growth | type | temperature | range | confidence |
|---|---|---|---|---|---|
| 1428 | positive | growth | 97 | hyperthermophilic | |
| 67770 | positive | growth | 95 | hyperthermophilic | |
| 69480 | thermophilic | 99.148 |
Physiology and metabolism
oxygen tolerance
| @ref | oxygen tolerance | confidence |
|---|---|---|
| 1428 | anaerobe | |
| 69480 | anaerobe | 99.423 |
spore formation
- @ref: 69480
- spore formation: no
- confidence: 99.607
compound production
- @ref: 1428
- compound: DNA polymerase Pfu
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 1428 | geothermally heated marine sediment | Vulcano island | Italy | ITA | Europe |
| 67770 | Hot sediment at the beach of Porto di Levante | Vulcano Island | Italy | ITA | Europe |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Marine |
| #Environmental | #Aquatic | #Sediment |
Safety information
risk assessment
- @ref: 1428
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Pyrococcus furiosus gene for 16S rRNA, partial sequence, strain: JCM 8422 | AB603518 | 1321 | ena | 2261 |
| 20218 | Pyrococcus furiosus 16S ribosomal RNA gene, partial sequence; 16S-23S intergenic ribosomal RNA spacer, complete sequence; tRNA-Ala gene, complete sequence; and 23S ribosomal RNA gene, partial sequence | L36458 | 471 | ena | 2261 |
| 20218 | 0002 Pyrococcus furiosus, cDNA Pyrococcus furiosus DSM 3638 cDNA clone A2 similar to 16S rRNA, mRNA sequence | T12765 | 74 | ena | 186497 |
| 20218 | 0009 Pyrococcus furiosus, cDNA Pyrococcus furiosus DSM 3638 cDNA clone D1 similar to 16S rRNA, mRNA sequence | T12772 | 155 | ena | 186497 |
| 20218 | 0010 Pyrococcus furiosus, cDNA Pyrococcus furiosus DSM 3638 cDNA clone D1 similar to 16S rRNA, mRNA sequence | T12773 | 76 | ena | 186497 |
| 20218 | 0012 Pyrococcus furiosus, cDNA Pyrococcus furiosus DSM 3638 cDNA clone E4 similar to 16S rRNA, mRNA sequence | T12779 | 75 | ena | 186497 |
| 20218 | 0023 Pyrococcus furiosus, cDNA Pyrococcus furiosus DSM 3638 cDNA clone M4 similar to 16S rRNA, mRNA sequence | T12785 | 206 | ena | 186497 |
| 20218 | 0024 Pyrococcus furiosus, cDNA Pyrococcus furiosus DSM 3638 cDNA clone M4 similar to 16S rRNA, mRNA sequence | T12786 | 160 | ena | 186497 |
| 20218 | 0028 Pyrococcus furiosus, cDNA Pyrococcus furiosus DSM 3638 cDNA clone M8 similar to 16S rRNA, mRNA sequence | T12790 | 185 | ena | 186497 |
| 20218 | 0029 Pyrococcus furiosus, cDNA Pyrococcus furiosus DSM 3638 cDNA clone M8 similar to 16S rRNA, mRNA sequence | T12791 | 120 | ena | 186497 |
| 20218 | 0035 Pyrococcus furiosus, cDNA Pyrococcus furiosus DSM 3638 cDNA clone N7 similar to 16S rRNA, mRNA sequence | T12797 | 190 | ena | 186497 |
| 20218 | 0036 Pyrococcus furiosus, cDNA Pyrococcus furiosus DSM 3638 cDNA clone N7 similar to 16S rRNA, mRNA sequence | T12801 | 328 | ena | 186497 |
| 20218 | 0037 Pyrococcus furiosus, cDNA Pyrococcus furiosus DSM 3638 cDNA clone N8 similar to 16S rRNA, mRNA sequence | T12802 | 144 | ena | 186497 |
| 20218 | 0038 Pyrococcus furiosus, cDNA Pyrococcus furiosus DSM 3638 cDNA clone O1 similar to 16S rRNA, mRNA sequence | T12803 | 127 | ena | 186497 |
| 20218 | 0044 Pyrococcus furiosus, cDNA Pyrococcus furiosus DSM 3638 cDNA clone O5 similar to 16S rRNA, mRNA sequence | T12808 | 146 | ena | 186497 |
| 20218 | 0045 Pyrococcus furiosus, cDNA Pyrococcus furiosus DSM 3638 cDNA clone O5 similar to 16S rRNA, mRNA sequence | T12809 | 142 | ena | 186497 |
| 20218 | 0051 Pyrococcus furiosus, cDNA Pyrococcus furiosus DSM 3638 cDNA clone 464 similar to 16S rRNA, mRNA sequence | T12812 | 166 | ena | 186497 |
| 20218 | 0052 Pyrococcus furiosus, cDNA Pyrococcus furiosus DSM 3638 cDNA clone 464 similar to 16S rRNA, mRNA sequence | T12813 | 91 | ena | 186497 |
| 20218 | 0053 Pyrococcus furiosus, cDNA Pyrococcus furiosus DSM 3638 cDNA clone 481 similar to 16S rRNA, mRNA sequence | T12814 | 166 | ena | 186497 |
| 20218 | 0054 Pyrococcus furiosus, cDNA Pyrococcus furiosus DSM 3638 cDNA clone 481 similar to 16S rRNA, mRNA sequence | T12815 | 174 | ena | 186497 |
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Pyrococcus furiosus DSM 3638 | GCA_008245085 | complete | ncbi | 186497 |
| 66792 | Pyrococcus furiosus DSM 3638 | GCA_000007305 | complete | ncbi | 186497 |
| 66792 | Pyrococcus furiosus DSM 3638 | 638154515 | complete | img | 186497 |
| 66792 | Pyrococcus furiosus DSM 3638 | 186497.12 | complete | patric | 186497 |
| 66792 | Pyrococcus furiosus DSM 3638 | 186497.32 | complete | patric | 186497 |
GC content
| @ref | GC-content | method |
|---|---|---|
| 1428 | 38.0 | |
| 67770 | 38.3 | thermal denaturation, midpoint method (Tm) |
| 67770 | 37.1 | high performance liquid chromatography (HPLC) |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | yes | 87 | no |
| motile | no | 81.657 | no |
| flagellated | no | 95.255 | no |
| gram-positive | no | 95.989 | no |
| anaerobic | yes | 99.322 | yes |
| aerobic | no | 96.771 | yes |
| halophile | no | 74.454 | no |
| spore-forming | no | 95.342 | no |
| glucose-util | yes | 82.745 | no |
| thermophile | yes | 100 | yes |
| glucose-ferment | no | 65.296 | no |
External links
@ref: 1428
culture collection no.: DSM 3638, ATCC 43587, JCM 8422, CGMCC 1.2516
straininfo link
- @ref: 85863
- straininfo: 45148
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Enzymology | 7628701 | Cloning and sequencing of a gene from the archaeon Pyrococcus furiosus with high homology to a gene encoding phosphoenolpyruvate synthetase from Escherichia coli. | Jones CE, Fleming TM, Piper PW, Littlechild JA, Cowan DA | Gene | 10.1016/0378-1119(95)00128-s | 1995 | Amino Acid Sequence, Archaea/enzymology/*genetics, Base Sequence, Cloning, Molecular, Escherichia coli/enzymology/*genetics, *Genes, Bacterial, Molecular Sequence Data, Open Reading Frames, Phosphotransferases (Paired Acceptors)/biosynthesis/*genetics, Sequence Homology, Amino Acid | Genetics |
| Phylogeny | 8085828 | Growth requirements of hyperthermophilic sulfur-dependent heterotrophic archaea isolated from a shallow submarine geothermal system with reference to their essential amino acids. | Hoaki T, Nishijima M, Kato M, Adachi K, Mizobuchi S, Hanzawa N, Maruyama T | Appl Environ Microbiol | 10.1128/aem.60.8.2898-2904.1994 | 1994 | Amino Acids, Essential/*metabolism, Anaerobiosis, Archaea/genetics/*growth & development/physiology/ultrastructure, Base Composition, Base Sequence, Culture Media, DNA, Ribosomal/analysis, Hot Temperature, Molecular Sequence Data, RNA, Ribosomal, 16S/genetics, Seawater, Sequence Analysis, DNA, *Soil Microbiology | Cultivation |
| Enzymology | 15584733 | Unusually broad substrate tolerance of a heat-stable archaeal sugar nucleotidyltransferase for the synthesis of sugar nucleotides. | Mizanur RM, Zea CJ, Pohl NL | J Am Chem Soc | 10.1021/ja046070d | 2004 | Amino Acid Sequence, Archaeal Proteins/*chemistry/genetics/*metabolism, Cloning, Molecular, Enzyme Stability, Hot Temperature, Kinetics, Molecular Sequence Data, Nucleotides/*biosynthesis, Nucleotidyltransferases/biosynthesis/*chemistry/genetics/*metabolism, Pyrococcus furiosus/enzymology/genetics, Recombinant Proteins/biosynthesis/chemistry/genetics, Spectrometry, Mass, Electrospray Ionization, Substrate Specificity, Sugar Phosphates/chemistry/*metabolism, UTP-Glucose-1-Phosphate Uridylyltransferase/chemistry/genetics/metabolism | Metabolism |
| Enzymology | 16511149 | Crystallization and preliminary X-ray diffraction analysis of a flavoenzyme amine dehydrogenase/oxidase from Pyrococcus furiosus DSM 3638. | Monaghan PJ, Leys D, Scrutton NS | Acta Crystallogr Sect F Struct Biol Cryst Commun | 10.1107/S1744309105020737 | 2005 | Crystallization, Monoamine Oxidase/*chemistry, Pyrococcus furiosus/*classification/*enzymology, Recombinant Proteins/chemistry, X-Ray Diffraction | Phylogeny |
| Enzymology | 17308866 | Characterization of a thermostable cyclodextrin glucanotransferase from Pyrococcus furiosus DSM3638. | Lee MH, Yang SJ, Kim JW, Lee HS, Kim JW, Park KH | Extremophiles | 10.1007/s00792-007-0061-6 | 2007 | Base Sequence, DNA Primers, Electrophoresis, Polyacrylamide Gel, Enzyme Stability, Glucosyltransferases/*metabolism, Hot Temperature, Hydrogen-Ion Concentration, Pyrococcus furiosus/*enzymology, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization | Stress |
| Metabolism | 17371548 | Mechanistic aspects and redox properties of hyperthermophilic L-proline dehydrogenase from Pyrococcus furiosus related to dimethylglycine dehydrogenase/oxidase. | Monaghan PJ, Leys D, Scrutton NS | FEBS J | 10.1111/j.1742-4658.2007.05750.x | 2007 | Amino Acid Sequence, Binding Sites, Dimethylglycine Dehydrogenase/*metabolism, Flavin-Adenine Dinucleotide/metabolism, Hydrogen-Ion Concentration, Molecular Sequence Data, Oxidation-Reduction, Oxidoreductases Acting on CH-NH Group Donors/*metabolism, Pipecolic Acids/metabolism, Proline/metabolism, Proline Oxidase/chemistry/*metabolism, Protein Subunits, Pyrococcus furiosus/*enzymology, Recombinant Proteins/isolation & purification, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, Temperature | Enzymology |
| Phylogeny | 17397865 | The crystal structure of a virus-like particle from the hyperthermophilic archaeon Pyrococcus furiosus provides insight into the evolution of viruses. | Akita F, Chong KT, Tanaka H, Yamashita E, Miyazaki N, Nakaishi Y, Suzuki M, Namba K, Ono Y, Tsukihara T, Nakagawa A | J Mol Biol | 10.1016/j.jmb.2007.02.075 | 2007 | Amino Acid Sequence, Bacteriophages/chemistry/ultrastructure, *Biological Evolution, Crystallography, X-Ray, Models, Molecular, Molecular Sequence Data, Phylogeny, *Protein Structure, Quaternary, Protein Subunits/chemistry/metabolism, Pyrococcus furiosus/chemistry/*virology, Sequence Alignment, *Viral Proteins/chemistry/classification/ultrastructure, *Viruses/chemistry/classification/ultrastructure | Genetics |
| Enzymology | 19421452 | Phosphomannose isomerase/GDP-mannose pyrophosphorylase from Pyrococcus furiosus: a thermostable biocatalyst for the synthesis of guanidinediphosphate-activated and mannose-containing sugar nucleotides. | Mizanur RM, Pohl NL | Org Biomol Chem | 10.1039/b822794b | 2009 | Archaeal Proteins, Enzyme Stability, Enzymes/metabolism, Guanosine Diphosphate/*chemistry, Mannose/*chemistry, Mannose-6-Phosphate Isomerase/isolation & purification/*metabolism, Mannosephosphates, Nucleotides/biosynthesis, Nucleotidyltransferases/chemistry/isolation & purification/*metabolism, Pyrococcus furiosus/*enzymology, Sugar Phosphates/chemistry, Uridine Diphosphate N-Acetylglucosamine | Metabolism |
| Enzymology | 21624508 | Expression and characterization of an extremely thermostable beta-glycosidase (mannosidase) from the hyperthermophilic archaeon Pyrococcus furiosus DSM3638. | Park SH, Park KH, Oh BC, Alli I, Lee BH | N Biotechnol | 10.1016/j.nbt.2011.05.002 | 2011 | Archaeal Proteins/*biosynthesis/chemistry/genetics/isolation & purification, Catalysis, Escherichia coli/enzymology/genetics, *Gene Expression, Genes, Archaeal/physiology, Hot Temperature, Hydrogen-Ion Concentration, Mannans/chemistry, Mannosidases/*biosynthesis/genetics, Mannosides/chemistry, Pyrococcus furiosus/chemistry/*enzymology/genetics/isolation & purification, Recombinant Proteins/*biosynthesis/chemistry/genetics/isolation & purification, Substrate Specificity/physiology | Phylogeny |
| Transcriptome | 21750103 | Parallel evolution of transcriptome architecture during genome reorganization. | Yoon SH, Reiss DJ, Bare JC, Tenenbaum D, Pan M, Slagel J, Moritz RL, Lim S, Hackett M, Menon AL, Adams MW, Barnebey A, Yannone SM, Leigh JA, Baliga NS | Genome Res | 10.1101/gr.122218.111 | 2011 | Adenosine Triphosphatases/genetics, Archaea/classification/genetics, *Evolution, Molecular, Gene Expression Profiling, Gene Expression Regulation, Archaeal, Genes, Archaeal, *Genome, Archaeal, Operon, Phylogeny, Promoter Regions, Genetic, Protein Biosynthesis/genetics, RNA Transport, Transcription, Genetic, Transcriptional Activation, *Transcriptome | Phylogeny |
| Genetics | 22057919 | Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and Pyrococcus furiosus DSM 3638. | Gao J, Wang J | Curr Microbiol | 10.1007/s00284-011-0035-x | 2011 | Archaeal Proteins/genetics, Genome, Archaeal, Molecular Sequence Annotation, Molecular Sequence Data, Open Reading Frames, Pyrococcus abyssi/*genetics, Pyrococcus furiosus/*genetics | |
| Enzymology | 22752365 | Comparative analysis of the catalytic components in the archaeal dye-linked L-proline dehydrogenase complexes. | Kawakami R, Noguchi C, Higashi M, Sakuraba H, Ohshima T | Appl Microbiol Biotechnol | 10.1007/s00253-012-4201-2 | 2012 | 2,6-Dichloroindophenol/metabolism, Chromatography, Affinity, Cloning, Molecular, Enzyme Stability, Escherichia coli/genetics/metabolism, Ferricyanides/metabolism, Gene Expression, Hot Temperature, Kinetics, Proline/*metabolism, Proline Oxidase/genetics/*metabolism, Protein Stability, Pyrococcus/*enzymology/genetics, Recombinant Proteins/chemistry/genetics/isolation & purification/metabolism, Thermococcus/*enzymology/genetics, Time Factors | Metabolism |
| Enzymology | 22789103 | Mutation studies in the active site of beta-glycosidase from Pyrococcus furiosus DSM 3638. | Park S, Alli I, Park K, Oh B, Lee B | Protein Pept Lett | PPL-EPUB-20120712-3 | 2013 | Amino Acid Sequence, Calorimetry, Catalytic Domain/*genetics, Glutamine/chemistry, Glycoside Hydrolases/*genetics/metabolism, Kinetics, Mutation, Pyrococcus furiosus/*enzymology, Substrate Specificity, Temperature, Tryptophan/chemistry, beta-Galactosidase/genetics, beta-Mannosidase/genetics | Metabolism |
| Metabolism | 22987782 | Crystal structure and nucleic acid-binding activity of the CRISPR-associated protein Csx1 of Pyrococcus furiosus. | Kim YK, Kim YG, Oh BH | Proteins | 10.1002/prot.24183 | 2012 | Amino Acid Sequence, Archaeal Proteins/chemistry/*genetics/metabolism, Crystallography, DNA, Archaeal/genetics/metabolism, Inverted Repeat Sequences/*genetics, Models, Molecular, Molecular Sequence Data, Protein Conformation, Pyrococcus furiosus/*chemistry/genetics/metabolism, Sequence Alignment | Genetics |
| 24683305 | An In Silico Approach for Characterization of an Aminoglycoside Antibiotic-Resistant Methyltransferase Protein from Pyrococcus furiosus (DSM 3638). | Oany AR, Jyoti TP, Ahmad SA | Bioinform Biol Insights | 10.4137/BBI.S14620 | 2014 | |||
| Phenotype | 25472011 | A mutant ('lab strain') of the hyperthermophilic archaeon Pyrococcus furiosus, lacking flagella, has unusual growth physiology. | Lewis DL, Notey JS, Chandrayan SK, Loder AJ, Lipscomb GL, Adams MW, Kelly RM | Extremophiles | 10.1007/s00792-014-0712-3 | 2014 | Cell Proliferation, Flagella/*genetics/ultrastructure, *Genes, Bacterial, *Mutation, Phenotype, Pyrococcus furiosus/*genetics/growth & development/metabolism/physiology, Transcriptome | Transcriptome |
| Metabolism | 27248999 | Expression and Characterization of a Novel Glycerophosphodiester Phosphodiesterase from Pyrococcus furiosus DSM 3638 That Possesses Lysophospholipase D Activity. | Wang F, Lai L, Liu Y, Yang B, Wang Y | Int J Mol Sci | 10.3390/ijms17060831 | 2016 | Archaeal Proteins/genetics/metabolism, Catalytic Domain, Kinetics, Models, Molecular, Molecular Docking Simulation, Phospholipids/metabolism, Phosphoric Diester Hydrolases/chemistry/*genetics/*metabolism, Phylogeny, Protein Structure, Tertiary, Pyrococcus furiosus/*enzymology/genetics, Sequence Analysis, DNA, Substrate Specificity | Enzymology |
| 30248960 | Dissecting the Repertoire of DNA-Binding Transcription Factors of the Archaeon Pyrococcus furiosus DSM 3638. | Denis A, Martinez-Nunez MA, Tenorio-Salgado S, Perez-Rueda E | Life (Basel) | 10.3390/life8040040 | 2018 | |||
| 31354685 | Next Generation DNA-Seq and Differential RNA-Seq Allow Re-annotation of the Pyrococcus furiosus DSM 3638 Genome and Provide Insights Into Archaeal Antisense Transcription. | Grunberger F, Reichelt R, Bunk B, Sproer C, Overmann J, Rachel R, Grohmann D, Hausner W | Front Microbiol | 10.3389/fmicb.2019.01603 | 2019 |
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 1428 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 3638) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-3638 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | 10.1093/nar/gkaa1025 | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
| 85863 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID45148.1 | StrainInfo: A central database for resolving microbial strain identifiers |