Strain identifier
BacDive ID: 168484
Type strain: 
Species: Bifidobacterium saguinibicoloris
Strain Designation: 79T10
Strain history: <- A. Margolles Barros, Instituto de Productos Lacteos de Asturias (IPLA); 79T10
NCBI tax ID(s): 2834433 (species)
General
@ref: 20215
BacDive-ID: 168484
DSM-Number: 112543
keywords: genome sequence, 16S sequence, Bacteria, anaerobe
description: Bifidobacterium saguinibicoloris 79T10 is an anaerobe bacterium of the family Bifidobacteriaceae.
NCBI tax id
- NCBI tax id: 2834433
- Matching level: species
strain history
- @ref: 69119
- history: <- A. Margolles Barros, Instituto de Productos Lacteos de Asturias (IPLA); 79T10
doi: 10.13145/bacdive168484.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Bifidobacteriales
- family: Bifidobacteriaceae
- genus: Bifidobacterium
- species: Bifidobacterium saguinibicoloris
- full scientific name: Bifidobacterium saguinibicoloris Lugli et al. 2021
@ref: 20215
domain: Bacteria
phylum: Actinomycetota
class: Actinomycetes
order: Bifidobacteriales
family: Bifidobacteriaceae
genus: Bifidobacterium
species: Bifidobacterium saguinibicoloris
full scientific name: Bifidobacterium saguinibicoloris Lugli et al. 2021
strain designation: 79T10
type strain: yes
Morphology
cell morphology
- @ref: 69480
- motility: no
- confidence: 92.5
Culture and growth conditions
culture medium
- @ref: 69119
- name: BIFIDOBACTERIUM MEDIUM (DSMZ Medium 58)
- growth: yes
- link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium58.pdf
culture temp
- @ref: 69119
- growth: positive
- type: growth
- temperature: 37
Sequence information
16S sequences
- @ref: 20215
- description: Bifidobacterium saguinibicoloris strain 79T10 16S ribosomal RNA gene, partial sequence
- accession: MZ573304
- length: 1516
- database: nuccore
- NCBI tax ID: 2834433
Genome sequences
- @ref: 66792
- description: Bifidobacterium saguinibicoloris 79T10
- accession: GCA_019331725
- assembly level: contig
- database: ncbi
- NCBI tax ID: 2834433
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 89.113 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | yes | 80.996 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 88.217 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 86.112 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 89.987 | yes |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 92.5 | no |
External links
@ref: 20215
culture collection no.: DSM 112543, LMG 32232
straininfo link
- @ref: 115179
- straininfo: 398343
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69119 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-112543 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 112543) | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 115179 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID398343.1 |