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Strain identifier

BacDive ID: 16846

Type strain: Yes

Species: Thermoanaerobacter sulfurigignens

Strain Designation: JW/SL-NZ 826

Strain history: <- J. Wiegel, Department of Microbiology, University of Georgia, Athens, USA; JW/SL-NZ 826 <- S.-Y. Liu and J. Wiegel {1994}

NCBI tax ID(s): 120958 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 7244

BacDive-ID: 16846

DSM-Number: 17917

keywords: 16S sequence, Bacteria, anaerobe, spore-forming, thermophilic, Gram-positive, motile, rod-shaped

description: Thermoanaerobacter sulfurigignens JW/SL-NZ 826 is an anaerobe, spore-forming, thermophilic bacterium that was isolated from acidic volcanic steam outlet.

NCBI tax id

  • NCBI tax id: 120958
  • Matching level: species

strain history: <- J. Wiegel, Department of Microbiology, University of Georgia, Athens, USA; JW/SL-NZ 826 <- S.-Y. Liu and J. Wiegel {1994}

doi: 10.13145/bacdive16846.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Thermoanaerobacterales
  • family: Thermoanaerobacteraceae
  • genus: Thermoanaerobacter
  • species: Thermoanaerobacter sulfurigignens
  • full scientific name: Thermoanaerobacter sulfurigignens Lee et al. 2007

@ref: 7244

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Thermoanaerobacterales

family: Thermoanaerobacteraceae

genus: Thermoanaerobacter

species: Thermoanaerobacter sulfurigignens

full scientific name: Thermoanaerobacter sulfurigignens Lee et al. 2007

strain designation: JW/SL-NZ 826

type strain: yes

Morphology

cell morphology

  • @ref: 31978
  • gram stain: positive
  • cell length: 2.6 µm
  • cell width: 0.65 µm
  • cell shape: rod-shaped
  • motility: yes

Culture and growth conditions

culture medium

  • @ref: 7244
  • name: PY + X MEDIUM (DSMZ Medium 104b)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/104b
  • composition: Name: PY + X MEDIUM (DSMZ Medium 104b) Composition: Yeast extract 10.0 g/l D-Glucose 5.0 g/l Trypticase peptone 5.0 g/l Meat peptone 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Sodium resazurin 0.0005 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
7244positivegrowth65thermophilic
31978positivegrowth34-72
31978positiveoptimum65thermophilic

culture pH

@refabilitytypepHPH range
31978positivegrowth4.0-8.0acidophile
31978positiveoptimum5.8

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
7244anaerobe
31978anaerobe

spore formation

  • @ref: 31978
  • spore formation: yes

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3197817057cellobiose+carbon source
3197828757fructose+carbon source
3197828260galactose+carbon source
3197817234glucose+carbon source
3197817716lactose+carbon source
3197817306maltose+carbon source
3197829864mannitol+carbon source
3197837684mannose+carbon source
3197815361pyruvate+carbon source
3197816634raffinose+carbon source
3197817992sucrose+carbon source
3197818222xylose+carbon source

Isolation, sampling and environmental information

isolation

  • @ref: 7244
  • sample type: acidic volcanic steam outlet
  • geographic location: White Island
  • country: New Zealand
  • origin.country: NZL
  • continent: Australia and Oceania

isolation source categories

Cat1Cat2Cat3
#Environmental#Air
#Environmental#Terrestrial#Volcanic
#Condition#Acidic

Safety information

risk assessment

  • @ref: 7244
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 7244
  • description: Thermoanaerobacter sulfurigignens strain JW/SL-NZ826 16S ribosomal RNA gene, partial sequence
  • accession: AF234164
  • length: 1501
  • database: ena
  • NCBI tax ID: 120958

GC content

  • @ref: 7244
  • GC-content: 34.5

External links

@ref: 7244

culture collection no.: DSM 17917, ATCC 700320

straininfo link

  • @ref: 20218
  • passport: http://www.straininfo.net/strains/720953

literature

  • topic: Phylogeny
  • Pubmed-ID: 17625170
  • title: Thermoanaerobacter sulfurigignens sp. nov., an anaerobic thermophilic bacterium that reduces 1 M thiosulfate to elemental sulfur and tolerates 90 mM sulfite.
  • authors: Lee YJ, Dashti M, Prange A, Rainey FA, Rohde M, Whitman WB, Wiegel J
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.64748-0
  • year: 2007
  • mesh: Carbohydrate Metabolism, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fermentation, Genes, rRNA, Glucose/metabolism, Hydrogen-Ion Concentration, Microscopy, Electron, Scanning, Molecular Sequence Data, New Zealand, Oxidation-Reduction, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sequence Homology, Nucleic Acid, *Soil Microbiology, Sulfites/*metabolism, Sulfur/metabolism, Temperature, Thermoanaerobacter/*classification/genetics/*isolation & purification/metabolism, Thiosulfates/*metabolism
  • topic2: Metabolism

Reference

@idauthorscataloguedoi/urltitlejournalpubmedID_cross_reference
7244Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 17917)https://www.dsmz.de/collection/catalogue/details/culture/DSM-17917
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
2823310.1099/ijs.0.64748-017625170
31978Barberan A, Caceres Velazquez H, Jones S, Fierer N.10.1128/mSphere.00237-17Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information2877604128233