Strain identifier
BacDive ID: 16846
Type strain:
Species: Thermoanaerobacter sulfurigignens
Strain Designation: JW/SL-NZ 826
Strain history: <- J. Wiegel, Department of Microbiology, University of Georgia, Athens, USA; JW/SL-NZ 826 <- S.-Y. Liu and J. Wiegel {1994}
NCBI tax ID(s): 120958 (species)
General
@ref: 7244
BacDive-ID: 16846
DSM-Number: 17917
keywords: 16S sequence, Bacteria, anaerobe, spore-forming, thermophilic, Gram-positive, motile, rod-shaped
description: Thermoanaerobacter sulfurigignens JW/SL-NZ 826 is an anaerobe, spore-forming, thermophilic bacterium that was isolated from acidic volcanic steam outlet.
NCBI tax id
- NCBI tax id: 120958
- Matching level: species
strain history
- @ref: 7244
- history: <- J. Wiegel, Department of Microbiology, University of Georgia, Athens, USA; JW/SL-NZ 826 <- S.-Y. Liu and J. Wiegel {1994}
doi: 10.13145/bacdive16846.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Thermoanaerobacterales
- family: Thermoanaerobacteraceae
- genus: Thermoanaerobacter
- species: Thermoanaerobacter sulfurigignens
- full scientific name: Thermoanaerobacter sulfurigignens Lee et al. 2007
@ref: 7244
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Thermoanaerobacterales
family: Thermoanaerobacteraceae
genus: Thermoanaerobacter
species: Thermoanaerobacter sulfurigignens
full scientific name: Thermoanaerobacter sulfurigignens Lee et al. 2007
strain designation: JW/SL-NZ 826
type strain: yes
Morphology
cell morphology
- @ref: 31978
- gram stain: positive
- cell length: 2.6 µm
- cell width: 0.65 µm
- cell shape: rod-shaped
- motility: yes
Culture and growth conditions
culture medium
- @ref: 7244
- name: PY + X MEDIUM (DSMZ Medium 104b)
- growth: yes
- link: https://mediadive.dsmz.de/medium/104b
- composition: Name: PY + X MEDIUM (DSMZ Medium 104b) Composition: Yeast extract 10.0 g/l D-Glucose 5.0 g/l Trypticase peptone 5.0 g/l Meat peptone 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Sodium resazurin 0.0005 g/l Distilled water
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
7244 | positive | growth | 65 | thermophilic |
31978 | positive | growth | 34-72 | |
31978 | positive | optimum | 65 | thermophilic |
culture pH
@ref | ability | type | pH | PH range |
---|---|---|---|---|
31978 | positive | growth | 4.0-8.0 | acidophile |
31978 | positive | optimum | 5.8 |
Physiology and metabolism
oxygen tolerance
@ref | oxygen tolerance |
---|---|
7244 | anaerobe |
31978 | anaerobe |
spore formation
- @ref: 31978
- spore formation: yes
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
31978 | 17057 | cellobiose | + | carbon source |
31978 | 28757 | fructose | + | carbon source |
31978 | 28260 | galactose | + | carbon source |
31978 | 17234 | glucose | + | carbon source |
31978 | 17716 | lactose | + | carbon source |
31978 | 17306 | maltose | + | carbon source |
31978 | 29864 | mannitol | + | carbon source |
31978 | 37684 | mannose | + | carbon source |
31978 | 15361 | pyruvate | + | carbon source |
31978 | 16634 | raffinose | + | carbon source |
31978 | 17992 | sucrose | + | carbon source |
31978 | 18222 | xylose | + | carbon source |
Isolation, sampling and environmental information
isolation
- @ref: 7244
- sample type: acidic volcanic steam outlet
- geographic location: White Island
- country: New Zealand
- origin.country: NZL
- continent: Australia and Oceania
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Air | |
#Environmental | #Terrestrial | #Volcanic |
#Condition | #Acidic |
Safety information
risk assessment
- @ref: 7244
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 7244
- description: Thermoanaerobacter sulfurigignens strain JW/SL-NZ826 16S ribosomal RNA gene, partial sequence
- accession: AF234164
- length: 1501
- database: ena
- NCBI tax ID: 120958
GC content
- @ref: 7244
- GC-content: 34.5
External links
@ref: 7244
culture collection no.: DSM 17917, ATCC 700320
straininfo link
- @ref: 85855
- straininfo: 400321
literature
- topic: Phylogeny
- Pubmed-ID: 17625170
- title: Thermoanaerobacter sulfurigignens sp. nov., an anaerobic thermophilic bacterium that reduces 1 M thiosulfate to elemental sulfur and tolerates 90 mM sulfite.
- authors: Lee YJ, Dashti M, Prange A, Rainey FA, Rohde M, Whitman WB, Wiegel J
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.64748-0
- year: 2007
- mesh: Carbohydrate Metabolism, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fermentation, Genes, rRNA, Glucose/metabolism, Hydrogen-Ion Concentration, Microscopy, Electron, Scanning, Molecular Sequence Data, New Zealand, Oxidation-Reduction, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sequence Homology, Nucleic Acid, *Soil Microbiology, Sulfites/*metabolism, Sulfur/metabolism, Temperature, Thermoanaerobacter/*classification/genetics/*isolation & purification/metabolism, Thiosulfates/*metabolism
- topic2: Metabolism
Reference
@id | authors | catalogue | doi/url | title | ID_cross_reference | pubmed |
---|---|---|---|---|---|---|
7244 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 17917) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-17917 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
31978 | Barberan A, Caceres Velazquez H, Jones S, Fierer N. | 10.1128/mSphere.00237-17 | Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information | 28233 | 28776041 | |
85855 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID400321.1 | StrainInfo: A central database for resolving microbial strain identifiers |