Strain identifier
BacDive ID: 168394
Type strain: 
Species: Thermophilibacter immobilis
Strain Designation: LZLJ-2
NCBI tax ID(s): 2779519 (species)
version 8.1 (current version)
General
@ref: 20215
BacDive-ID: 168394
keywords: genome sequence, 16S sequence, Bacteria
description: Thermophilibacter immobilis LZLJ-2 is a bacterium of the family Atopobiaceae.
NCBI tax id
- NCBI tax id: 2779519
- Matching level: species
doi: 10.13145/bacdive168394.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Coriobacteriia
- order: Coriobacteriales
- family: Atopobiaceae
- genus: Thermophilibacter
- species: Thermophilibacter immobilis
- full scientific name: Thermophilibacter immobilis Lu et al. 2021
@ref: 20215
domain: Bacteria
phylum: Actinomycetota
class: Coriobacteriia
order: Coriobacteriales
family: Atopobiaceae
genus: Thermophilibacter
species: Thermophilibacter immobilis
full scientific name: Thermophilibacter immobilis Lu et al. 2021
strain designation: LZLJ-2
type strain: yes
Sequence information
16S sequences
- @ref: 20215
- description: Thermophilibacter immobilis strain LZLJ-2 16S ribosomal RNA gene, partial sequence
- accession: MT525318
- length: 1438
- database: ena
- NCBI tax ID: 2779519
Genome sequences
- @ref: 66792
- description: Thermophilibacter immobilis LZLJ-2
- accession: GCA_015277515
- assembly level: complete
- database: ncbi
- NCBI tax ID: 2779519
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| flagellated | no | 97.354 | no |
| gram-positive | yes | 91.705 | no |
| anaerobic | yes | 96.872 | no |
| aerobic | no | 98.49 | no |
| halophile | no | 82.767 | no |
| spore-forming | no | 95.994 | no |
| glucose-util | yes | 87.321 | no |
| thermophile | no | 84.772 | no |
| motile | no | 90.193 | no |
| glucose-ferment | yes | 68.346 | no |
External links
@ref: 20215
culture collection no.: JCM 34224, KCTC 25162
literature
- topic: Phylogeny
- Pubmed-ID: 34914571
- title: Reclassification of Olsenella gallinarum as Thermophilibacter gallinarum comb. nov. and description of Thermophilibacter immobilis sp. nov., isolated from the mud in a fermentation cellar used for the production of Chinese Luzhou-flavour Baijiu.
- authors: Lu LF, Yang Y, Zheng L, Zhang R, Liu GQ, Tu TY, Xu T, Luo X, Ran MF, Zhang LQ, Wang ST, Shen CH, Zhang YG
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijsem.0.005192
- year: 2021
- mesh: Actinobacteria/*classification/isolation & purification, Alcoholic Beverages, Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, *Fatty Acids/chemistry, *Fermentation, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology
- topic2: Transcriptome
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |