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Strain identifier

BacDive ID: 168330

Type strain: Yes

Species: Variovorax rhizosphaerae

NCBI tax ID(s): 1836200 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 7.1 (current version):
version 7:
version 7.1 (current version)

General

@ref: 20215

BacDive-ID: 168330

keywords: 16S sequence, Bacteria

description: Variovorax rhizosphaerae KACC 18900 is a bacterium of the family Comamonadaceae.

NCBI tax id

  • NCBI tax id: 1836200
  • Matching level: species

doi: 10.13145/bacdive168330.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Comamonadaceae
  • genus: Variovorax
  • species: Variovorax rhizosphaerae
  • full scientific name: Variovorax rhizosphaerae Nguyen et al. 2018

@ref: 20215

domain: Bacteria

phylum: Pseudomonadota

class: Betaproteobacteria

order: Burkholderiales

family: Comamonadaceae

genus: Variovorax

species: Variovorax rhizosphaerae

full scientific name: Variovorax rhizosphaerae Nguyen et al. 2018

type strain: yes

Sequence information

16S sequences

  • @ref: 20215
  • description: Variovorax rhizosphaerae 16S ribosomal RNA gene, partial sequence
  • accession: KU973603
  • length: 1489
  • database: ena
  • NCBI tax ID: 1836200

External links

@ref: 20215

culture collection no.: KACC 18900, UCM-G28, NBRC112307

literature

  • topic: Phylogeny
  • Pubmed-ID: 29948826
  • title: Proposal of three novel species of soil bacteria, Variovorax ureilyticus, Variovorax rhizosphaerae, and Variovorax robiniae, in the family Comamonadaceae.
  • authors: Nguyen TM, Trinh NH, Kim J
  • journal: J Microbiol
  • DOI: 10.1007/s12275-018-8025-3
  • year: 2018
  • mesh: Bacterial Typing Techniques, Base Composition, Comamonadaceae/chemistry/*classification/*genetics/isolation & purification, DNA, Bacterial/genetics, Fatty Acids/analysis, Nucleic Acid Hybridization, Phosphatidylethanolamines/analysis, Phospholipids/analysis, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Ubiquinone/analysis
  • topic2: Transcriptome

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332