General

@ref: 15965

BacDive-ID: 16801

DSM-Number: 21804

keywords: genome sequence, 16S sequence, Bacteria, anaerobe, mesophilic

description: Tepidanaerobacter acetatoxydans Re1 is an anaerobe, mesophilic bacterium that was isolated from silage of alfalfa in a stirred laboratory reactor.

NCBI tax id

• NCBI tax id: 499229
• Matching level: species

strain history

doi: 10.13145/bacdive16801.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/bacillota
• domain: Bacteria
• phylum: Bacillota
• class: Clostridia
• order: Thermosediminibacterales
• family: Tepidanaerobacteraceae
• genus: Tepidanaerobacter
• species: Tepidanaerobacter acetatoxydans
• full scientific name: Tepidanaerobacter acetatoxydans Westerholm et al. 2011

@ref: 15965

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Thermoanaerobacterales

family: Tepidanaerobacteraceae

genus: Tepidanaerobacter

species: Tepidanaerobacter acetatoxydans

full scientific name: Tepidanaerobacter acetatoxydans Westerholm et al. 2011

strain designation: Re1

type strain: yes

Culture and growth conditions

culture medium

• @ref: 15965
• name: TEPIDANAEROBACTER ACETATOXYDANS MEDIUM (DSMZ Medium 1301)
• growth: yes
• link: https://mediadive.dsmz.de/medium/1301
• composition: Name: TEPIDANAEROBACTER ACETATOXYDANS MEDIUM (DSMZ Medium 1301) Composition: D-Glucose 1.8 g/l Na2CO3 1.5 g/l L-Cysteine HCl x H2O 0.5 g/l Na2HPO4 0.43 g/l KH2PO4 0.41 g/l Na2S x 9 H2O 0.3 g/l NH4Cl 0.3 g/l NaCl 0.3 g/l Yeast extract 0.2 g/l CaCl2 x 2 H2O 0.11 g/l MgCl2 x 6 H2O 0.1 g/l FeCl2 x 4 H2O 0.002 g/l Na2-EDTA 0.0005 g/l NaOH 0.0005 g/l Sodium resazurin 0.0005 g/l CoCl2 x 6 H2O 0.00019 g/l MnCl2 x 4 H2O 0.0001 g/l ZnCl2 7e-05 g/l Na2MoO4 x 2 H2O 3.6e-05 g/l NiCl2 x 6 H2O 2.4e-05 g/l Pyridoxine hydrochloride 2e-05 g/l (DL)-alpha-Lipoic acid 1e-05 g/l Riboflavin 1e-05 g/l p-Aminobenzoic acid 1e-05 g/l Calcium D-(+)-pantothenate 1e-05 g/l Thiamine HCl 1e-05 g/l AlCl3 1e-05 g/l Nicotinic acid 1e-05 g/l H3BO3 6e-06 g/l Folic acid 4e-06 g/l Na2WO4 x 2 H2O 4e-06 g/l Biotin 4e-06 g/l Na2SeO3 x 5 H2O 3e-06 g/l CuCl2 x 2 H2O 2e-06 g/l Vitamin B12 2e-07 g/l Distilled water

culture temp

Physiology and metabolism

oxygen tolerance

• @ref: 15965
• oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

isolation source categories

taxonmaps

• @ref: 69479
• File name: preview.99_6228.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_560;96_2965;97_3646;98_4614;99_6228&stattab=map
• Last taxonomy: Tepidanaerobacter acetatoxydans subclade
• 16S sequence: EU386163
• Sequence Identity:
• Total samples: 4897
• soil counts: 174
• aquatic counts: 806
• animal counts: 3804
• plant counts: 113

Sequence information

16S sequences

• @ref: 15965
• description: Tepidanaerobacter acetatoxydans Re1 16S ribosomal RNA gene, partial sequence
• accession: EU386163
• length: 1458
• database: ena
• NCBI tax ID: 1209989

Genome sequences

GC content

• @ref: 15965
• GC-content: 38.4
• method: high performance liquid chromatography (HPLC)

Genome-based predictions

predictions

External links

@ref: 15965

culture collection no.: DSM 21804, JCM 16047

literature

• topic: Phylogeny
• Pubmed-ID: 21498020
• title: Tepidanaerobacter acetatoxydans sp. nov., an anaerobic, syntrophic acetate-oxidizing bacterium isolated from two ammonium-enriched mesophilic methanogenic processes.
• authors: Westerholm M, Roos S, Schnurer A
• journal: Syst Appl Microbiol
• DOI: 10.1016/j.syapm.2010.11.018
• year: 2011
• mesh: Acetates/metabolism, Anaerobiosis, Base Composition, Carbon/metabolism, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Formate-Tetrahydrofolate Ligase/genetics, Gram-Positive Bacteria/*classification/genetics/*isolation & purification/physiology, Hot Temperature, Locomotion, Molecular Sequence Data, Nucleic Acid Hybridization, Oxidation-Reduction, Phylogeny, Quaternary Ammonium Compounds/metabolism, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sewage/*microbiology
• topic2: Metabolism

Reference