Strain identifier

BacDive ID: 16792

Type strain: No

Species: Caldanaerobacter subterraneus

Strain Designation: OCA1

Strain history: <- M.-L. Fardeau, Lab. Microbiol. de l'IRD/ESIL, Univ. de Provence et de la Méditerranée, Marseille, France; OCA1 <- M. Bonilla {1999}

NCBI tax ID(s): 911092 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 1:
version 8.1 (current version)

General

@ref: 6086

BacDive-ID: 16792

DSM-Number: 15729

keywords: 16S sequence, Bacteria, anaerobe, thermophilic

description: Caldanaerobacter subterraneus OCA1 is an anaerobe, thermophilic bacterium that was isolated from oil field.

NCBI tax id

  • NCBI tax id: 911092
  • Matching level: species

strain history

  • @ref: 6086
  • history: <- M.-L. Fardeau, Lab. Microbiol. de l'IRD/ESIL, Univ. de Provence et de la Méditerranée, Marseille, France; OCA1 <- M. Bonilla {1999}

doi: 10.13145/bacdive16792.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Thermoanaerobacterales
  • family: Thermoanaerobacteraceae
  • genus: Caldanaerobacter
  • species: Caldanaerobacter subterraneus
  • full scientific name: Caldanaerobacter subterraneus (Fardeau et al. 2000) Fardeau et al. 2004
  • synonyms

    • @ref: 20215
    • synonym: Thermoanaerobacter subterraneus

@ref: 6086

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Thermoanaerobacterales

family: Thermoanaerobacteraceae

genus: Caldanaerobacter

species: Caldanaerobacter subterraneus

full scientific name: Caldanaerobacter subterraneus (Fardeau et al. 2000) Fardeau et al. 2004

strain designation: OCA1

type strain: no

Culture and growth conditions

culture medium

  • @ref: 6086
  • name: THERMOANAEROBACTER SUBTERRANEUS MEDIUM (DSMZ Medium 899)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/899
  • composition: Name: CALDANAEROBACTER MEDIUM (DSMZ Medium 899) Composition: D-Glucose 3.9604 g/l Na2S2O3 x 5 H2O 2.47525 g/l Yeast extract 1.9802 g/l NH4Cl 0.990099 g/l Na2CO3 0.990099 g/l MgCl2 x 6 H2O 0.990099 g/l L-Cysteine HCl x H2O 0.49505 g/l Na2S x 9 H2O 0.445545 g/l K2HPO4 0.29703 g/l KH2PO4 0.29703 g/l KCl 0.19802 g/l MgSO4 x 7 H2O 0.029703 g/l Nitrilotriacetic acid 0.0148515 g/l NaCl 0.00990099 g/l MnSO4 x H2O 0.00495049 g/l CoSO4 x 7 H2O 0.00178218 g/l ZnSO4 x 7 H2O 0.00178218 g/l CaCl2 x 2 H2O 0.000990099 g/l FeSO4 x 7 H2O 0.000990099 g/l Sodium resazurin 0.00049505 g/l NiCl2 x 6 H2O 0.00029703 g/l AlK(SO4)2 x 12 H2O 0.00019802 g/l CuSO4 x 5 H2O 9.90099e-05 g/l H3BO3 9.90099e-05 g/l Na2MoO4 x 2 H2O 9.90099e-05 g/l Na2WO4 x 2 H2O 3.9604e-06 g/l Na2SeO3 x 5 H2O 2.9703e-06 g/l Distilled water

culture temp

  • @ref: 6086
  • growth: positive
  • type: growth
  • temperature: 70
  • range: thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 6086
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 6086
  • sample type: oil field
  • country: Australia
  • origin.country: AUS
  • continent: Australia and Oceania

isolation source categories

Cat1Cat2Cat3
#Engineered#Industrial#Oil reservoir
#Environmental#Terrestrial#Geologic

Sequence information

16S sequences

  • @ref: 6086
  • description: Thermoanaerobacter subterraneus strain OCA1 16S ribosomal RNA gene, partial sequence
  • accession: AY216596
  • length: 1320
  • database: ena
  • NCBI tax ID: 911092

GC content

  • @ref: 6086
  • GC-content: 39.4

External links

@ref: 6086

culture collection no.: DSM 15729

straininfo link

  • @ref: 85808
  • straininfo: 144472

Reference

@idauthorscataloguedoi/urltitle
6086Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 15729)https://www.dsmz.de/collection/catalogue/details/culture/DSM-15729
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
85808Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID144472.1StrainInfo: A central database for resolving microbial strain identifiers