Strain identifier
BacDive ID: 167887
Type strain:
Species: Acholeplasma brassicae
Strain Designation: 0502
NCBI tax ID(s): 1318465 (strain), 61635 (species)
version 9.2 (current version)
General
@ref: 20215
BacDive-ID: 167887
keywords: 16S sequence, Bacteria
description: Acholeplasma brassicae 0502 is a bacterium of the family Acholeplasmataceae.
NCBI tax id
NCBI tax id | Matching level |
---|---|
61635 | species |
1318465 | strain |
doi: 10.13145/bacdive167887.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/mycoplasmatota
- domain: Bacteria
- phylum: Mycoplasmatota
- class: Mollicutes
- order: Acholeplasmatales
- family: Acholeplasmataceae
- genus: Acholeplasma
- species: Acholeplasma brassicae
- full scientific name: Acholeplasma brassicae Tully et al. 1994
synonyms
- @ref: 20215
- synonym: Paracholeplasma brassicae
@ref: 20215
domain: Bacteria
phylum: Mycoplasmatota
class: Mollicutes
order: Acholeplasmatales
family: Acholeplasmataceae
genus: Acholeplasma
species: Acholeplasma brassicae
full scientific name: Acholeplasma brassicae Tully et al. 1994
strain designation: 0502
type strain: yes
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_763.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_16749;96_462;97_529;98_609;99_763&stattab=map
- Last taxonomy: Acholeplasma brassicae subclade
- 16S sequence: AY538163
- Sequence Identity:
- Total samples: 2798
- soil counts: 387
- aquatic counts: 591
- animal counts: 1764
- plant counts: 56
Safety information
risk assessment
- @ref: 20215
- biosafety level: 1
- biosafety level comment: Risk group
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20215 | Acholeplasma brassicae 16S ribosomal RNA gene, partial sequence | AY538163 | 1430 | nuccore | 1318465 |
124043 | Acholeplasma brassicae 16S/23S rRNA spacer region 1 and tRNA-Ile gene, complete sequence. | AF005317 | 327 | nuccore | 1318465 |
124043 | Acholeplasma brassicae 16S/23S rRNA spacer region 2, complete sequence | AF005318 | 183 | nuccore | 1318465 |
External links
@ref: 20215
culture collection no.: ATCC 49388
straininfo link
- @ref: 115046
- straininfo: 42447
literature
- topic: Phylogeny
- Pubmed-ID: 7981098
- title: Acholeplasma brassicae sp. nov. and Acholeplasma palmae sp. nov., two non-sterol-requiring mollicutes from plant surfaces.
- authors: Tully JG, Whitcomb RF, Rose DL, Bove JM, Carle P, Somerson NL, Williamson DL, Eden-Green S
- journal: Int J Syst Bacteriol
- DOI: 10.1099/00207713-44-4-680
- year: 1994
- mesh: Acholeplasma/*classification/genetics/growth & development, Brassica/*microbiology, Cholesterol/pharmacology, Cocos/*microbiology
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
115046 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID42447.1 |
124043 | Dr. Isabel Schober, Dr. Julia Koblitz | Data extracted from sequence databases, automatically matched based on designation and taxonomy |