Strain identifier

BacDive ID: 167887

Type strain: Yes

Species: Acholeplasma brassicae

Strain Designation: 0502

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 20215

BacDive-ID: 167887

keywords: 16S sequence, Bacteria

description: Acholeplasma brassicae 0502 is a bacterium of the family Acholeplasmataceae.

NCBI tax id

NCBI tax idMatching level
61635species
1318465strain

doi: 10.13145/bacdive167887.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/mycoplasmatota
  • domain: Bacteria
  • phylum: Mycoplasmatota
  • class: Mollicutes
  • order: Acholeplasmatales
  • family: Acholeplasmataceae
  • genus: Acholeplasma
  • species: Acholeplasma brassicae
  • full scientific name: Acholeplasma brassicae Tully et al. 1994
  • synonyms

    • @ref: 20215
    • synonym: Paracholeplasma brassicae

@ref: 20215

domain: Bacteria

phylum: Mycoplasmatota

class: Mollicutes

order: Acholeplasmatales

family: Acholeplasmataceae

genus: Acholeplasma

species: Acholeplasma brassicae

full scientific name: Acholeplasma brassicae Tully et al. 1994

strain designation: 0502

type strain: yes

Isolation, sampling and environmental information

taxonmaps

  • @ref: 69479
  • File name: preview.99_763.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_16749;96_462;97_529;98_609;99_763&stattab=map
  • Last taxonomy: Acholeplasma brassicae subclade
  • 16S sequence: AY538163
  • Sequence Identity:
  • Total samples: 2798
  • soil counts: 387
  • aquatic counts: 591
  • animal counts: 1764
  • plant counts: 56

Safety information

risk assessment

  • @ref: 20215
  • biosafety level: 1
  • biosafety level comment: Risk group

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20215Acholeplasma brassicae 16S ribosomal RNA gene, partial sequenceAY5381631430nuccore1318465
124043Acholeplasma brassicae 16S/23S rRNA spacer region 1 and tRNA-Ile gene, complete sequence.AF005317327nuccore1318465
124043Acholeplasma brassicae 16S/23S rRNA spacer region 2, complete sequenceAF005318183nuccore1318465

External links

@ref: 20215

culture collection no.: ATCC 49388

straininfo link

  • @ref: 115046
  • straininfo: 42447

literature

  • topic: Phylogeny
  • Pubmed-ID: 7981098
  • title: Acholeplasma brassicae sp. nov. and Acholeplasma palmae sp. nov., two non-sterol-requiring mollicutes from plant surfaces.
  • authors: Tully JG, Whitcomb RF, Rose DL, Bove JM, Carle P, Somerson NL, Williamson DL, Eden-Green S
  • journal: Int J Syst Bacteriol
  • DOI: 10.1099/00207713-44-4-680
  • year: 1994
  • mesh: Acholeplasma/*classification/genetics/growth & development, Brassica/*microbiology, Cholesterol/pharmacology, Cocos/*microbiology

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
115046Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID42447.1
124043Dr. Isabel Schober, Dr. Julia KoblitzData extracted from sequence databases, automatically matched based on designation and taxonomy