Strain identifier

BacDive ID: 167745

Type strain: Yes

Species: Thermophilibacter mediterraneus

NCBI tax ID(s): 1871031 (species)

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For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 20215

BacDive-ID: 167745

keywords: 16S sequence, Bacteria

description: Thermophilibacter mediterraneus Marseille-P3256 is a bacterium of the family Atopobiaceae.

NCBI tax id

  • NCBI tax id: 1871031
  • Matching level: species

doi: 10.13145/bacdive167745.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Coriobacteriia
  • order: Coriobacteriales
  • family: Atopobiaceae
  • genus: Thermophilibacter
  • species: Thermophilibacter mediterraneus
  • full scientific name: Thermophilibacter mediterraneus Zgheib et al. 2021

  • synonyms

    • @ref: 20215
    • synonym: Olsenella mediterranea

@ref: 20215

domain: Bacteria

phylum: Actinomycetota

class: Coriobacteriia

order: Coriobacteriales

family: Atopobiaceae

genus: Thermophilibacter

species: Thermophilibacter mediterraneus

full scientific name: Thermophilibacter mediterraneus Zgheib et al. 2021

type strain: yes

Isolation, sampling and environmental information

taxonmaps

  • @ref: 69479
  • File name: preview.99_6900.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_150;96_1681;97_2014;98_3595;99_6900&stattab=map
  • Last taxonomy: Olsenella mediterranea
  • 16S sequence: LT598591
  • Sequence Identity:
  • Total samples: 913
  • soil counts: 30
  • aquatic counts: 25
  • animal counts: 843
  • plant counts: 15

Sequence information

16S sequences

  • @ref: 20215
  • description: Olsenella sp. Marseille-P3256 partial 16S rRNA gene, strain Marseille-P3256
  • accession: LT598591
  • length: 1434
  • database: ena
  • NCBI tax ID: 1871031

External links

@ref: 20215

culture collection no.: Marseille-P3256, CSURP3256, CECT 9977

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny34047688New human-associated species of the family Atopobiaceae and proposal to reclassify members of the genus Olsenella.Zgheib R, Anani H, Meng MM, Mailhe M, Ricaboni D, Morand A, Caputo A, Traore SI, Fontanini A, Armstrong N, Raoult D, Fournier PEInt J Syst Evol Microbiol10.1099/ijsem.0.0048192021Actinobacteria/*classification, Bacterial Typing Techniques, DNA, Bacterial/genetics, Genomics, Humans, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNAGenetics
Phylogeny34914571Reclassification of Olsenella gallinarum as Thermophilibacter gallinarum comb. nov. and description of Thermophilibacter immobilis sp. nov., isolated from the mud in a fermentation cellar used for the production of Chinese Luzhou-flavour Baijiu.Lu LF, Yang Y, Zheng L, Zhang R, Liu GQ, Tu TY, Xu T, Luo X, Ran MF, Zhang LQ, Wang ST, Shen CH, Zhang YGInt J Syst Evol Microbiol10.1099/ijsem.0.0051922021Actinobacteria/*classification/isolation & purification, Alcoholic Beverages, Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, *Fatty Acids/chemistry, *Fermentation, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil MicrobiologyTranscriptome

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/