Strain identifier
BacDive ID: 167571
Type strain:
Species: Acholeplasma morum
Strain Designation: 72-043
NCBI tax ID(s): 264637 (species)
version 9.1 (current version)
General
@ref: 20215
BacDive-ID: 167571
keywords: genome sequence, 16S sequence, Bacteria, animal pathogen
description: Acholeplasma morum 72-043 is an animal pathogen of the family Acholeplasmataceae.
NCBI tax id
- NCBI tax id: 264637
- Matching level: species
doi: 10.13145/bacdive167571.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/mycoplasmatota
- domain: Bacteria
- phylum: Mycoplasmatota
- class: Mollicutes
- order: Acholeplasmatales
- family: Acholeplasmataceae
- genus: Acholeplasma
- species: Acholeplasma morum
- full scientific name: Acholeplasma morum Rose et al. 1980
synonyms
- @ref: 20215
- synonym: Paracholeplasma morum
@ref: 20215
domain: Bacteria
phylum: Mycoplasmatota
class: Mollicutes
order: Acholeplasmatales
family: Acholeplasmataceae
genus: Acholeplasma
species: Acholeplasma morum
full scientific name: Acholeplasma morum Rose et al. 1980
strain designation: 72-043
type strain: yes
Morphology
cell morphology
- @ref: 69480
- motility: no
- confidence: 92.6
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_79829.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_16749;96_33603;97_42605;98_55637;99_79829&stattab=map
- Last taxonomy: Acholeplasma morum subclade
- 16S sequence: AY538168
- Sequence Identity:
- Total samples: 1050
- soil counts: 162
- aquatic counts: 345
- animal counts: 494
- plant counts: 49
Safety information
risk assessment
- @ref: 20215
- pathogenicity animal: yes
- biosafety level: 2
- biosafety level comment: Risk group
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20215 | Acholeplasma morum 16S ribosomal RNA gene, partial sequence | AY538168 | 1427 | nuccore | 264637 |
124043 | Acholeplasma morum strain ATCC 33211 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene; operon 1, partial sequence. | AY738727 | 769 | nuccore | 264637 |
124043 | Acholeplasma morum strain ATCC 33211 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene; operon 2, partial sequence. | AY738728 | 876 | nuccore | 264637 |
Genome sequences
- @ref: 66792
- description: Paracholeplasma morum ATCC 33211
- accession: GCA_016907055
- assembly level: contig
- database: ncbi
- NCBI tax ID: 264637
Genome-based predictions
predictions
@ref | trait | model | description | prediction | confidence | training_data |
---|---|---|---|---|---|---|
69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 65.732 | no |
69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | yes | 51.138 | no |
69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 92.799 | no |
69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 83.728 | no |
69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 95.212 | no |
69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 92.6 | no |
External links
@ref: 20215
culture collection no.: NCTC 10188, ATCC 33211
straininfo link
- @ref: 114974
- straininfo: 40393
literature
- topic: Metabolism
- Pubmed-ID: 8863414
- title: Comparative metabolism of Mesoplasma, Entomoplasma, Mycoplasma, and Acholeplasma.
- authors: Pollack JD, Williams MV, Banzon J, Jones MA, Harvey L, Tully JG
- journal: Int J Syst Bacteriol
- DOI: 10.1099/00207713-46-4-885
- year: 1996
- mesh: Acholeplasma/*metabolism, Adenosine Triphosphate/metabolism, Glucosephosphate Dehydrogenase/metabolism, Multienzyme Complexes/metabolism, Mycoplasma/*metabolism, NADH, NADPH Oxidoreductases/metabolism, Tenericutes/*metabolism
- topic2: Enzymology
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |
114974 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID40393.1 |
124043 | Dr. Isabel Schober, Dr. Julia Koblitz | Data extracted from sequence databases, automatically matched based on designation and taxonomy |