Strain identifier
BacDive ID: 167145
Type strain: 
Species: Chlamydia poikilotherma
Strain Designation: S15-834K, S15-834K
Strain history: <- N. Borel, University of Zurich, Institute of Veterinary Pathology; S15-834K
NCBI tax ID(s): 1967783 (species)
General
@ref: 20215
BacDive-ID: 167145
DSM-Number: 106149
keywords: genome sequence, Bacteria, mesophilic
description: Chlamydia poikilotherma S15-834K is a mesophilic bacterium that was isolated from cloaca of snake Pantherophis guttatus .
NCBI tax id
- NCBI tax id: 1967783
- Matching level: species
strain history
- @ref: 68867
- history: <- N. Borel, University of Zurich, Institute of Veterinary Pathology; S15-834K
doi: 10.13145/bacdive167145.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/chlamydiota
- domain: Bacteria
- phylum: Chlamydiota
- class: Chlamydiia
- order: Chlamydiales
- family: Chlamydiaceae
- genus: Chlamydia
- species: Chlamydia poikilotherma
- full scientific name: Chlamydia poikilotherma Staub et al. 2022
synonyms
- @ref: 20215
- synonym: Chlamydia poikilothermis
@ref: 20215
domain: Bacteria
phylum: Chlamydiota
class: Chlamydiia
order: Chlamydiales
family: Chlamydiaceae
genus: Chlamydia
species: Chlamydia poikilotherma
full scientific name: Chlamydia poikilotherma Staub et al. 2022
strain designation: S15-834K, S15-834K
type strain: yes
Culture and growth conditions
culture medium
- @ref: 68867
- name: Chlamydia serpentis & poikilotherma Medium (DSMZ Medium 1793)
- growth: yes
- link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium1793.pdf
culture temp
- @ref: 68867
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 68867
- sample type: cloaca of snake Pantherophis guttatus (swab sample)
- geographic location: Niederglatt, ZH
- country: Switzerland
- origin.country: CHE
- continent: Europe
- latitude: 47.3786
- longitude: 8.54
Sequence information
Genome sequences
- @ref: 66792
- description: Chlamydia poikilotherma S15-834K
- accession: GCA_900239975
- assembly level: complete
- database: ncbi
- NCBI tax ID: 1967783
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| flagellated | no | 96.455 | no |
| gram-positive | no | 96.342 | no |
| anaerobic | no | 62.055 | no |
| aerobic | no | 91.743 | no |
| halophile | yes | 60.553 | no |
| spore-forming | no | 97.535 | no |
| thermophile | no | 79.931 | yes |
| glucose-util | yes | 78.977 | no |
| motile | no | 68.666 | no |
| glucose-ferment | no | 50 | no |
External links
@ref: 20215
culture collection no.: CSUR Q6003, DSM 106149
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 68867 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-106149 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 106149) |