Strain identifier
BacDive ID: 167135
Type strain: 
Species: Leptospira neocaledonica
Strain Designation: ES4-C-A1, ES4-C-A1
Strain history: CIP <- 2019, M. Picardeau, Inst. Pasteur, Paris, France: strain ES4-C-A1 <- 2016, C. Goarant, Inst. Pasteur, Nouméa, New Caledonia, France
NCBI tax ID(s): 2023192 (species)
General
@ref: 20215
BacDive-ID: 167135
DSM-Number: 110364
keywords: 16S sequence, Bacteria
description: Leptospira neocaledonica ES4-C-A1 is a bacterium that was isolated from Environment, Soil.
NCBI tax id
- NCBI tax id: 2023192
- Matching level: species
strain history
- @ref: 121266
- history: CIP <- 2019, M. Picardeau, Inst. Pasteur, Paris, France: strain ES4-C-A1 <- 2016, C. Goarant, Inst. Pasteur, Nouméa, New Caledonia, France
doi: 10.13145/bacdive167135.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/spirochaetota
- domain: Bacteria
- phylum: Spirochaetota
- class: Spirochaetia
- order: Leptospirales
- family: Leptospiraceae
- genus: Leptospira
- species: Leptospira neocaledonica
- full scientific name: Leptospira neocaledonica Thibeaux et al. 2020
@ref: 20215
domain: Bacteria
phylum: Spirochaetota
class: Spirochaetia
order: Leptospirales
family: Leptospiraceae
genus: Leptospira
species: Leptospira neocaledonica
full scientific name: Leptospira neocaledonica Thibeaux et al. 2020
strain designation: ES4-C-A1, ES4-C-A1
type strain: yes
Culture and growth conditions
culture medium
- @ref: 121266
- name: CIP Medium 189
- growth: yes
- link: https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=189
Isolation, sampling and environmental information
isolation
- @ref: 121266
- sample type: Environment, Soil
- geographic location: Koné, New Caledonia
- country: France
- origin.country: FRA
- continent: Europe
- isolation date: 2016-06-13
Safety information
risk assessment
- @ref: 121266
- biosafety level: 1
- biosafety level comment: Risk group (French classification)
Sequence information
16S sequences
- @ref: 20215
- description: Leptospira neocaledonica strain ES4-C-A1 contig_26, whole genome shotgun sequence
- accession: NPEA01000026
- length: 1994
- database: ena
- NCBI tax ID: 2023192
External links
@ref: 20215
culture collection no.: DSM 110364, KIT0268, CIP 111776, KIT 0268
straininfo link
- @ref: 114899
- straininfo: 412406
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 114899 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID412406.1 | |
| 121266 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20111776 | Collection of Institut Pasteur (CIP 111776) |