Strain identifier
version 8.1 (current version)
General
@ref: 20215
BacDive-ID: 167133
keywords: genome sequence, 16S sequence, Bacteria
description: Acetobacter conturbans LMG 1627 is a bacterium of the family Acetobacteraceae.
NCBI tax id
- NCBI tax id: 1737472
- Matching level: species
doi: 10.13145/bacdive167133.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Rhodospirillales
- family: Acetobacteraceae
- genus: Acetobacter
- species: Acetobacter conturbans
- full scientific name: Acetobacter conturbans Sombolestani et al. 2020
@ref: 20215
domain: Bacteria
phylum: Pseudomonadota
class: Alphaproteobacteria
order: Rhodospirillales
family: Acetobacteraceae
genus: Acetobacter
species: Acetobacter conturbans
full scientific name: Acetobacter conturbans Sombolestani et al. 2020
type strain: yes
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_2615.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_29;96_152;97_827;98_2025;99_2615&stattab=map
- Last taxonomy: Acetobacter
- 16S sequence: MN744433
- Sequence Identity:
- Total samples: 888
- soil counts: 133
- aquatic counts: 132
- animal counts: 499
- plant counts: 124
Sequence information
16S sequences
- @ref: 20215
- description: Acetobacter conturbans strain LMG 1627 16S ribosomal RNA gene, partial sequence
- accession: MN744433
- length: 1476
- database: ena
- NCBI tax ID: 1737472
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Acetobacter conturbans LMG 1627 | GCA_011516755 | contig | ncbi | 1737472 |
66792 | Acetobacter sp. LMG 1627 | 1737472.3 | wgs | patric | 1737472 |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
motile | yes | 71.882 | no |
gram-positive | no | 95.591 | no |
anaerobic | no | 99.179 | no |
aerobic | yes | 91.838 | no |
halophile | no | 91.685 | no |
spore-forming | no | 96.202 | no |
thermophile | no | 97.352 | no |
glucose-util | yes | 88.718 | no |
flagellated | no | 78.54 | no |
glucose-ferment | no | 88.95 | no |
External links
@ref: 20215
culture collection no.: LMG 1627, NCIMB 8945
literature
- topic: Phylogeny
- Pubmed-ID: 33052084
- title: Novel acetic acid bacteria from cider fermentations: Acetobacter conturbans sp. nov. and Acetobacter fallax sp. nov.
- authors: Sombolestani AS, Cleenwerck I, Cnockaert M, Borremans W, Wieme AD, De Vuyst L, Vandamme P
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijsem.0.004511
- year: 2020
- mesh: *Acetic Acid, Acetobacter/*classification/isolation & purification, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Fermentation, Fermented Foods/*microbiology, Nucleic Acid Hybridization, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA
- topic2: Transcriptome
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |