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Strain identifier

BacDive ID: 167132

Type strain: Yes

Species: Pseudomonas lalkuanensis

Strain Designation: PE08

NCBI tax ID(s): 2604832 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 7.1 (current version):
version 7:
version 7.1 (current version)

General

@ref: 20215

BacDive-ID: 167132

keywords: 16S sequence, Bacteria

description: Pseudomonas lalkuanensis PE08 is a bacterium of the family Pseudomonadaceae.

NCBI tax id

  • NCBI tax id: 2604832
  • Matching level: species

doi: 10.13145/bacdive167132.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Pseudomonadaceae
  • genus: Pseudomonas
  • species: Pseudomonas lalkuanensis
  • full scientific name: Pseudomonas lalkuanensis Thorat et al. 2020

@ref: 20215

domain: Bacteria

phylum: Pseudomonadota

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Pseudomonas

species: Pseudomonas lalkuanensis

full scientific name: Pseudomonas lalkuanensis Thorat et al. 2020

strain designation: PE08

type strain: yes

Sequence information

16S sequences

  • @ref: 20215
  • description: Pseudomonas lalkuanensis strain PE08 chromosome, complete genome
  • accession: CP043311
  • length: 6056953
  • database: ena
  • NCBI tax ID: 2604832

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Pseudomonas lalkuanensis PE08GCA_008807375completencbi2604832
66792Pseudomonas aeruginosa XDR-PAGCA_900708705contigpatric287

External links

@ref: 20215

culture collection no.: CCUG 73691, KCTC 72454, MCC 3792

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny33174829Pseudomonas lalkuanensis sp. nov., isolated from a bacterial consortia of contaminated soil enriched for the remediation of e-waste.Thorat V, Kirdat K, Tiwarekar B, DaCosta E, Debbarma P, Shouche Y, Sathe S, Goel R, Lodha T, Yadav AInt J Syst Evol Microbiol10.1099/ijsem.0.0045592020Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, *Electronic Waste, Fatty Acids/chemistry, Genes, Bacterial, India, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, Pseudomonas/*classification/isolation & purification, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, *Soil PollutantsTranscriptome
Phylogeny35819404Pseudomonas boanensis sp. nov., a bacterium isolated from river water used for household purposes in Boane District, Mozambique.Nicklasson M, Martin-Rodriguez AJ, Thorell K, Higdon SM, Neves L, Mussagy A, Rydberg HA, Hernroth B, Svensson-Stadler L, Sjoling AInt J Syst Evol Microbiol10.1099/ijsem.0.0054612022Bacteria, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, *Fatty Acids/chemistry, Mozambique, Nucleic Acid Hybridization, Phylogeny, Pseudomonas, RNA, Ribosomal, 16S/genetics, *Rivers/microbiology, Sequence Analysis, DNA, WaterTranscriptome

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes