Strain identifier

BacDive ID: 16689

Type strain: Yes

Species: Syntrophospora bryantii

Strain Designation: CuCa1

Strain history: <- M. Stieb and B. Schink, CuCa1

NCBI tax ID(s): 2082 (species)

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General

@ref: 1272

BacDive-ID: 16689

DSM-Number: 102356

keywords: 16S sequence, Bacteria, anaerobe, mesophilic

description: Syntrophospora bryantii CuCa1 is an anaerobe, mesophilic bacterium that was isolated from marine sediment.

NCBI tax id

  • NCBI tax id: 2082
  • Matching level: species

strain history

  • @ref: 1272
  • history: <- M. Stieb and B. Schink, CuCa1

doi: 10.13145/bacdive16689.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Syntrophomonadaceae
  • genus: Syntrophospora
  • species: Syntrophospora bryantii
  • full scientific name: Syntrophospora bryantii (Stieb and Schink 1985) Zhao et al. 1990

  • synonyms

    @refsynonym
    20215Syntrophomonas bryantii
    20215Clostridium bryantii

@ref: 1272

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Clostridiales

family: Syntrophomonadaceae

genus: Syntrophospora

species: Syntrophospora bryantii

full scientific name: Syntrophospora bryantii (Stieb and Schink 1985) Zhao et al. 1990

strain designation: CuCa1

type strain: yes

Morphology

colony morphology

  • @ref: 1272
  • incubation period: 3-7 days

Culture and growth conditions

culture medium

  • @ref: 1272
  • name: SYNTROPHOMONAS BRYANTII MEDIUM (DSMZ Medium 325)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/325
  • composition: Name: SYNTROPHOSPORA MEDIUM (DSMZ Medium 325) Composition: NaCl 20.9581 g/l MgCl2 x 6 H2O 3.09381 g/l Na2SO4 2.99401 g/l Na2CO3 1.49701 g/l Na-caproate 1.39721 g/l KCl 0.499002 g/l Na2S x 9 H2O 0.399202 g/l NH4Cl 0.299401 g/l KH2PO4 0.199601 g/l CaCl2 x 2 H2O 0.149701 g/l HCl 0.00249501 g/l FeCl2 x 4 H2O 0.00149701 g/l Sodium resazurin 0.000499002 g/l CoCl2 x 6 H2O 0.000189621 g/l Pyridoxine hydrochloride 9.98004e-05 g/l MnCl2 x 4 H2O 9.98004e-05 g/l ZnCl2 6.98603e-05 g/l (DL)-alpha-Lipoic acid 4.99002e-05 g/l p-Aminobenzoic acid 4.99002e-05 g/l Calcium D-(+)-pantothenate 4.99002e-05 g/l Nicotinic acid 4.99002e-05 g/l Thiamine HCl 4.99002e-05 g/l Riboflavin 4.99002e-05 g/l Na2MoO4 x 2 H2O 3.59281e-05 g/l NiCl2 x 6 H2O 2.39521e-05 g/l Folic acid 1.99601e-05 g/l Biotin 1.99601e-05 g/l H3BO3 5.98802e-06 g/l CuCl2 x 2 H2O 1.99601e-06 g/l Vitamin B12 9.98004e-07 g/l Distilled water

culture temp

  • @ref: 1272
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 1272
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 1272
  • sample type: marine sediment
  • geographic location: Cuxhaven
  • country: Germany
  • origin.country: DEU
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Marine
#Environmental#Aquatic#Sediment

taxonmaps

  • @ref: 69479
  • File name: preview.99_156661.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_397;96_7352;97_8822;98_103256;99_156661&stattab=map
  • Last taxonomy: Syntrophomonas bryantii subclade
  • 16S sequence: HE654006
  • Sequence Identity:
  • Total samples: 318
  • soil counts: 42
  • aquatic counts: 141
  • animal counts: 94
  • plant counts: 41

Safety information

risk assessment

  • @ref: 1272
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 1272
  • description: Syntrophomonas bryantii partial 16S rRNA gene, type strain DSM 3014T
  • accession: HE654006
  • length: 1553
  • database: ena
  • NCBI tax ID: 2082

External links

@ref: 1272

culture collection no.: DSM 102356, DSM 3014A

straininfo link

  • @ref: 85708
  • straininfo: 406999

Reference

@idauthorscataloguedoi/urltitle
1272Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 102356)https://www.dsmz.de/collection/catalogue/details/culture/DSM-102356
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
85708Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID406999.1StrainInfo: A central database for resolving microbial strain identifiers